Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05330 and BL00085

See DNA alignment / Visit BSNT_05330 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:26
# Commandline: needle
#    -asequence pep-align/BSNT_05330___nagB.1.5803.seq
#    -bsequence pep-align/BL00085___nagB.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05330___nagB-BL00085___nagB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05330___nagB-BL00085___nagB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05330___nagB
# 2: BL00085___nagB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 248
# Identity:     126/248 (50.8%)
# Similarity:   166/248 (66.9%)
# Gaps:           6/248 ( 2.4%)
# Score: 651.0
# 
#
#=======================================

BSNT_05330___      1 MKVMECQTYEELSQKAARITADTIKEKPDAVLGLATGGTPEGTYRELIRL     50
                     ||::|.:.|:::||.|||...:.:......||||||||||.|||:.|...
BL00085___nag      1 MKIIEAKDYQDMSQSAARFIIEQVNRLSAPVLGLATGGTPLGTYQVLRED     50

BSNT_05330___     51 HQTENLSFQNITTVNLDEYAGLSSNAPNSYHFYMNDRLFQHIDSKPSRHF    100
                     |.....:::::.|||||||.|:|.:..|||.|||..:||.|||...|...
BL00085___nag     51 HARNKTTYKHVYTVNLDEYVGVSPDHENSYTFYMKKQLFDHIDIPLSHTH    100

BSNT_05330___    101 IPNGNADDLEAECRRYEQLVESLGGTDIQLLGIGRNGHIGFNEPGTSFKS    150
                     :|||.|.|.:|||.|||.|:|.|||.|:|:||:|.|||||||||||.|.|
BL00085___nag    101 LPNGMACDQDAECSRYEALIERLGGIDLQVLGLGLNGHIGFNEPGTPFSS    150

BSNT_05330___    151 RTHVVTLNEQTRQANARYFPSIDSVPKKALTMGIQTILSSKRILLLISGK    200
                     :||.|.|.:.|::||||||.|.|:||.:|:||||.||:.||:||||:||:
BL00085___nag    151 KTHTVELTQSTKEANARYFDSYDAVPSQAITMGISTIMKSKQILLLVSGE    200

BSNT_05330___    201 SKAEAVRKLLEGNISEDFPASALHLHSDVTVLIDREAASLRP------    242
                     .||..:.|||....:||.|||.|..|.||.::.|.:|.|:..      
BL00085___nag    201 KKAGILAKLLTEEPNEDTPASVLKTHQDVVIIADSDALSIVKERGMAF    248


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