Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00001 and BL00076

See DNA alignment / Visit BSNT_00001 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:39
# Commandline: needle
#    -asequence pep-align/BSNT_00001___dnaA.1.5803.seq
#    -bsequence pep-align/BL00076___dnaA.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00001___dnaA-BL00076___dnaA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00001___dnaA-BL00076___dnaA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00001___dnaA
# 2: BL00076___dnaA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 446
# Identity:     424/446 (95.1%)
# Similarity:   436/446 (97.8%)
# Gaps:           0/446 ( 0.0%)
# Score: 2184.0
# 
#
#=======================================

BSNT_00001___      1 MENILDLWNQALAQIEKKLSKPSFETWMKSTKAHSLQGDTLTITAPNEFA     50
                     |:||.|||||||.||||||||||||||||||||||||||||.||||||||
BL00076___dna      1 MKNISDLWNQALGQIEKKLSKPSFETWMKSTKAHSLQGDTLIITAPNEFA     50

BSNT_00001___     51 RDWLESRYLHLIADTIYELTGEELSIKFVIPQNQDVEDFMPKPQVKKAVK    100
                     |||||||||||||||||:||||||||||||||||:.||||||..:||..|
BL00076___dna     51 RDWLESRYLHLIADTIYDLTGEELSIKFVIPQNQNEEDFMPKSPIKKMSK    100

BSNT_00001___    101 EDTSDFPQNMLNPKYTFDTFVIGSGNRFAHAASLAVAEAPAKAYNPLFIY    150
                     |:.:||||||||||||||||||||||||||||||||||||||||||||||
BL00076___dna    101 EEPADFPQNMLNPKYTFDTFVIGSGNRFAHAASLAVAEAPAKAYNPLFIY    150

BSNT_00001___    151 GGVGLGKTHLMHAIGHYVIDHNPSAKVVYLSSEKFTNEFINSIRDNKAVD    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BL00076___dna    151 GGVGLGKTHLMHAIGHYVIDHNPSAKVVYLSSEKFTNEFINSIRDNKAVD    200

BSNT_00001___    201 FRNRYRNVDVLLIDDIQFLAGKEQTQEEFFHTFNTLHEESKQIVISSDRP    250
                     |||||||||||||||||||||||||||||||||||||||:||||||||||
BL00076___dna    201 FRNRYRNVDVLLIDDIQFLAGKEQTQEEFFHTFNTLHEETKQIVISSDRP    250

BSNT_00001___    251 PKEIPTLEDRLRSRFEWGLITDITPPDLETRIAILRKKAKAEGLDIPNEV    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BL00076___dna    251 PKEIPTLEDRLRSRFEWGLITDITPPDLETRIAILRKKAKAEGLDIPNEV    300

BSNT_00001___    301 MLYIANQIDSNIRELEGALIRVVAYSSLINKDINADLAAEALKDIIPSSK    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BL00076___dna    301 MLYIANQIDSNIRELEGALIRVVAYSSLINKDINADLAAEALKDIIPSSK    350

BSNT_00001___    351 PKVITIKEIQRVVGQQFNIKLEDFKAKKRTKSVAFPRQIAMYLSREMTDS    400
                     |||||||:|||:||||||||||||||||||||||||||||||||||||||
BL00076___dna    351 PKVITIKDIQRIVGQQFNIKLEDFKAKKRTKSVAFPRQIAMYLSREMTDS    400

BSNT_00001___    401 SLPKIGEEFGGRDHTTVIHAHEKISKLLADDEQLQQHVKEIKEQLK    446
                     ||||||||||||||||||||||||||||:|||||||.:|||||||:
BL00076___dna    401 SLPKIGEEFGGRDHTTVIHAHEKISKLLSDDEQLQQQIKEIKEQLR    446


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