Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_04373 and BL00068

See DNA alignment / Visit BSNT_04373 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:32
# Commandline: needle
#    -asequence pep-align/BSNT_04373.1.5803.seq
#    -bsequence pep-align/BL00068___ytzE.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04373-BL00068___ytzE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04373-BL00068___ytzE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04373
# 2: BL00068___ytzE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 73
# Identity:      55/73 (75.3%)
# Similarity:    56/73 (76.7%)
# Gaps:          16/73 (21.9%)
# Score: 283.0
# 
#
#=======================================

BSNT_04373         1 ----------------MFIQEKGLVTTQELVDEFGITPRTIQRDLNVLAY     34
                                     |||||||||||||||||||.||||||||||||||
BL00068___ytz      1 MKPSTNRMLTRIKSVYMFIQEKGLVTTQELVDEFGTTPRTIQRDLNVLAY     50

BSNT_04373        35 NDLVHSPSRGKWETTRKKVKITS     57
                     |||||||||||||||||||||:|
BL00068___ytz     51 NDLVHSPSRGKWETTRKKVKISS     73


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.