Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04373 and BL00068

See Amino acid alignment / Visit BSNT_04373 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:32
# Commandline: needle
#    -asequence dna-align/BSNT_04373.1.5803.seq
#    -bsequence dna-align/BL00068___ytzE.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04373-BL00068___ytzE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04373-BL00068___ytzE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04373
# 2: BL00068___ytzE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 222
# Identity:     137/222 (61.7%)
# Similarity:   137/222 (61.7%)
# Gaps:          48/222 (21.6%)
# Score: 537.0
# 
#
#=======================================

BSNT_04373         1 ------------------------------------------------AT      2
                                                                     ||
BL00068___ytz      1 TTGAAACCTTCAACAAACCGAATGCTAACCAGGATCAAATCAGTCTACAT     50

BSNT_04373         3 GTTTATCCAAGAAAAAGGTCTTGTGACAACACAGGAACTGGTTGACGAAT     52
                     |||.||.||||||||.||.||.||.|||||.||||||||||||||.||||
BL00068___ytz     51 GTTCATTCAAGAAAAGGGACTCGTTACAACCCAGGAACTGGTTGATGAAT    100

BSNT_04373        53 TCGGCATTACACCTAGAACGATTCAAAGAGACTTAAATGTGTTGGCATAT    102
                     |.||||.||||||.|||||.||.||..|.||..|.||||||||||||||.
BL00068___ytz    101 TTGGCACTACACCGAGAACAATCCAGCGTGATCTGAATGTGTTGGCATAC    150

BSNT_04373       103 AATGATCTTGTTCATAGTCCAAGCCGTGGCAAGTGGGAGACAACGAGAAA    152
                     ||.|||||.||.||.||.||.|||.|.|||||.||||||||.||.|||||
BL00068___ytz    151 AACGATCTAGTACACAGCCCCAGCAGAGGCAAATGGGAGACTACAAGAAA    200

BSNT_04373       153 GAAAGTAAAGATTACCTCATAA    174
                     .|||||.||.||..|||||||.
BL00068___ytz    201 AAAAGTGAAAATCTCCTCATAG    222


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