Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04373 and BL00068
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:32
# Commandline: needle
# -asequence dna-align/BSNT_04373.1.5803.seq
# -bsequence dna-align/BL00068___ytzE.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04373-BL00068___ytzE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04373-BL00068___ytzE.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04373
# 2: BL00068___ytzE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 222
# Identity: 137/222 (61.7%)
# Similarity: 137/222 (61.7%)
# Gaps: 48/222 (21.6%)
# Score: 537.0
#
#
#=======================================
BSNT_04373 1 ------------------------------------------------AT 2
||
BL00068___ytz 1 TTGAAACCTTCAACAAACCGAATGCTAACCAGGATCAAATCAGTCTACAT 50
BSNT_04373 3 GTTTATCCAAGAAAAAGGTCTTGTGACAACACAGGAACTGGTTGACGAAT 52
|||.||.||||||||.||.||.||.|||||.||||||||||||||.||||
BL00068___ytz 51 GTTCATTCAAGAAAAGGGACTCGTTACAACCCAGGAACTGGTTGATGAAT 100
BSNT_04373 53 TCGGCATTACACCTAGAACGATTCAAAGAGACTTAAATGTGTTGGCATAT 102
|.||||.||||||.|||||.||.||..|.||..|.||||||||||||||.
BL00068___ytz 101 TTGGCACTACACCGAGAACAATCCAGCGTGATCTGAATGTGTTGGCATAC 150
BSNT_04373 103 AATGATCTTGTTCATAGTCCAAGCCGTGGCAAGTGGGAGACAACGAGAAA 152
||.|||||.||.||.||.||.|||.|.|||||.||||||||.||.|||||
BL00068___ytz 151 AACGATCTAGTACACAGCCCCAGCAGAGGCAAATGGGAGACTACAAGAAA 200
BSNT_04373 153 GAAAGTAAAGATTACCTCATAA 174
.|||||.||.||..|||||||.
BL00068___ytz 201 AAAAGTGAAAATCTCCTCATAG 222
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