Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04380 and BL00066
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:32
# Commandline: needle
# -asequence pep-align/BSNT_04380.1.5803.seq
# -bsequence pep-align/BL00066___opuD.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04380-BL00066___opuD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04380-BL00066___opuD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04380
# 2: BL00066___opuD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 511
# Identity: 247/511 (48.3%)
# Similarity: 276/511 (54.0%)
# Gaps: 212/511 (41.5%)
# Score: 1316.0
#
#
#=======================================
BSNT_04380 0 -------------------------------------------------- 0
BL00066___opu 1 MKNISSVFWIVIVITAAAVLWGIVAPDNLQALTTSIQGYVTNTLGWYYLL 50
BSNT_04380 0 -------------------------------------------------- 0
BL00066___opu 51 VVSLFVAFSIFLIFSPIGKIRLGKPEEKPEFSRLSWFAMLFSAGMGIGLV 100
BSNT_04380 0 -------------------------------------------------- 0
BL00066___opu 101 FYGAAEPISHYAISSPSGETETAQAFRDSLRYTFFHWGLHAWAIYAIVAL 150
BSNT_04380 0 -------------------------------------------------- 0
BL00066___opu 151 CIAYFQFRKDAPGLISATLFPVFGDRVNGPLGKGIDCIAVFATVVGVATS 200
BSNT_04380 1 -----------MNYLFGIPNAFIVQLVLIIIVTVLFLLSAWSGLGKGIKY 39
::||||:||:|.|||.:|.::|||||:|||||:||||||
BL00066___opu 201 LGIGATQINGGLHYLFGVPNSFQVQLAIIAVITVLFLISAWSGIGKGIKY 250
BSNT_04380 40 LSNTNMVLAGLLMLFMLVVGPTVLIMNSFTDSIGQYIQNIVQMSFRLTPN 89
||||||||||:||:|||.|||||||||||||:||.||.|:|||||||.||
BL00066___opu 251 LSNTNMVLAGVLMIFMLFVGPTVLIMNSFTDTIGTYISNVVQMSFRLAPN 300
BSNT_04380 90 DPEKREWINSWTIFYWAWWISWSPFVGIFIARVSRGRTIREFLIGVLVTP 139
||:.||||||||||||||||||||||||||||||||||||||||.||..|
BL00066___opu 301 DPDSREWINSWTIFYWAWWISWSPFVGIFIARVSRGRTIREFLIAVLFAP 350
BSNT_04380 140 CILTFLWFSIFGVSAMDLQQKGTFNVAKLSTETMLFGTLDHYPLTMVTSI 189
.:|.||||||||||||||||||.||||||||:|||||..|||||.|:|||
BL00066___opu 351 TVLAFLWFSIFGVSAMDLQQKGIFNVAKLSTDTMLFGMFDHYPLAMITSI 400
BSNT_04380 190 LALILIAVFFITSADSATFVLGMQTSYGSLNPANSVKLSWGIIQSAMAAV 239
:||:|||||||||||||||||||||:||||||.||||:||||||||||..
BL00066___opu 401 VALLLIAVFFITSADSATFVLGMQTTYGSLNPENSVKISWGIIQSAMAGA 450
BSNT_04380 240 LLYSGGLAALQNTAILAALPFSIVILLMIASLYQSLSKERREIKKAEKLD 289
|||||||:||||||||||||||:|::|||.|||:|||:||:|||:|||..
BL00066___opu 451 LLYSGGLSALQNTAILAALPFSVVVILMIVSLYKSLSQERKEIKQAEKFQ 500
BSNT_04380 290 KPRSPRVKKAY 300
||||||||||
BL00066___opu 501 KPRSPRVKKA- 510
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