Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04424 and BL00063

See DNA alignment / Visit BSNT_04424 in genome browser / Return to Orthologue table

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# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:36
# Commandline: needle
#    -asequence pep-align/BSNT_04424___yttA.1.5803.seq
#    -bsequence pep-align/BL00063___yttA.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04424___yttA-BL00063___yttA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04424___yttA-BL00063___yttA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04424___yttA
# 2: BL00063___yttA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 248
# Identity:      99/248 (39.9%)
# Similarity:   141/248 (56.9%)
# Gaps:          22/248 ( 8.9%)
# Score: 412.0
# 
#
#=======================================

BSNT_04424___      1 MEMVLAFLGFLACLIALGYGLYHLVRYVLKKEKRFSKRLFWPLFIGGLVL     50
                     ||.:: .:|||:.|.::.|.::||:|.:....||||::||:|.|.|||:|
BL00063___ytt      1 MESIM-LIGFLSFLFSICYLVFHLIRRIFSPGKRFSRKLFYPCFAGGLLL     49

BSNT_04424___     51 LFTGAALAEPDTAAANAEKKYSALNAEYKNLTKEHEELEKEYKSVSSEAK    100
                     |...|...:.:|.||: |||...|..|.:.|..||..|:||..::..:.|
BL00063___ytt     50 LIISAPYYDEETYAAD-EKKTENLTTELQELKTEHSALQKEQTALKQQVK     98

BSNT_04424___    101 KLKDNKEDQDKLEKLKNENSDLKKTQKSLKAEIKELQENQKQLKEDAKTA    150
                     :.  ||    ||:.:|.||..|||..:.|..|...|.:..|.|.|  |.|
BL00063___ytt     99 QA--NK----KLKAVKAENDTLKKENEKLTKEKDSLTKKTKSLTE--KLA    140

BSNT_04424___    151 KAENETLRQDKTKLENQLKETESQTASSHEDTGSSSNNTSKSDETKTADK    200
                     |||.::     ...|..:||   ::|::..:...|:....||    :|:.
BL00063___ytt    141 KAEEKS-----GSAETSVKE---KSAAAQAEASHSTPAAKKS----SAES    178

BSNT_04424___    201 AEGCNIKGSKNGIYHTPGSTYYDRTTDPAEMFCSVEEAEAAGYRAPKR    248
                     .:.|.||||.|.|||||||||||||.:.|..||:.:||..||||.|||
BL00063___ytt    179 KQECKIKGSVNHIYHTPGSTYYDRTKNVARWFCTEQEARDAGYRPPKR    226


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