Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04335 and BL00053

See DNA alignment / Visit BSNT_04335 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:29
# Commandline: needle
#    -asequence pep-align/BSNT_04335___ytxH.1.5803.seq
#    -bsequence pep-align/BL00053___ytxH.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04335___ytxH-BL00053___ytxH.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04335___ytxH-BL00053___ytxH.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04335___ytxH
# 2: BL00053___ytxH
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 152
# Identity:      87/152 (57.2%)
# Similarity:   117/152 (77.0%)
# Gaps:          14/152 ( 9.2%)
# Score: 420.5
# 
#
#=======================================

BSNT_04335___      1 MMSKDGINSKDFLIGTLIGGIIGATTALFLAPKSGKELRDDLGSQAVALR     50
                      |||||:|:|||||||.:||||||..|||||||||||||||||:|||.|:
BL00053___ytx      1 -MSKDGMNTKDFLIGTFVGGIIGAAAALFLAPKSGKELRDDLGNQAVVLK     49

BSNT_04335___     51 DKTDKMTADAKEKGTQYVSIAKDKTSNITQLVADQSGQIMNKVKDLRDRS    100
                     |||.|:|::|:|:|::||||||:|||:|:|||||||.|||:||||||.:.
BL00053___ytx     50 DKTGKLTSEARERGSEYVSIAKEKTSSISQLVADQSSQIMDKVKDLRSKG     99

BSNT_04335___    101 KSDKTDSSTAMQDMREEAMQAADETKDQVLQTKEDVKDELKDAQKQAEQL    150
                      ::|..      :::|||..|.:|   |..:.|.:::||   |:|.|:..
BL00053___ytx    100 -AEKAG------ELKEEASSAIEE---QAEEAKNEIEDE---ARKTADTA    136

BSNT_04335___    151 NR    152
                     .:
BL00053___ytx    137 QK    138


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