Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04358 and BL00042
See
DNA alignment /
Visit
BSNT_04358 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:31
# Commandline: needle
# -asequence pep-align/BSNT_04358___trmB.1.5803.seq
# -bsequence pep-align/BL00042___trmB.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04358___trmB-BL00042___trmB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04358___trmB-BL00042___trmB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04358___trmB
# 2: BL00042___trmB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 213
# Identity: 172/213 (80.8%)
# Similarity: 190/213 (89.2%)
# Gaps: 0/213 ( 0.0%)
# Score: 924.0
#
#
#=======================================
BSNT_04358___ 1 MRMRHKPWADDFLAENADISISNPADYKGKWNTVFGNDNPIHIEVGTGKG 50
|||||||||||:||||:.|.||.|:.|||||::|||||||||||||||||
BL00042___trm 1 MRMRHKPWADDYLAENSHIVISEPSQYKGKWHSVFGNDNPIHIEVGTGKG 50
BSNT_04358___ 51 QFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDADTL 100
|||||||.||||:||||||||||||||||.|||.:||.|||||||:|:.|
BL00042___trm 51 QFISGMALQNPDVNYIGIELFKSVIVTAVDKVKQTEAPNVKLLNINANML 100
BSNT_04358___ 101 TDVFEPGEVKRVYLNFSDPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIH 150
:|||..|||.|||||||||||||||||||||...||||||:|:|..|:||
BL00042___trm 101 SDVFADGEVDRVYLNFSDPWPKKRHEKRRLTNHAFLKKYEQVLGGKGAIH 150
BSNT_04358___ 151 FKTDNRGLFEYSLKSFSEYGLLLTYVSLDLHNSNLEGNIMTEYEEKFSAL 200
|||||||||||||.|||||||:||:||||||.|:.|||:||||||||:|.
BL00042___trm 151 FKTDNRGLFEYSLTSFSEYGLVLTFVSLDLHQSDFEGNVMTEYEEKFAAK 200
BSNT_04358___ 201 GQPIYRAEVEWRT 213
||||||.|.||||
BL00042___trm 201 GQPIYRVEAEWRT 213
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.