Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04362 and BL00041

See DNA alignment / Visit BSNT_04362 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:31
# Commandline: needle
#    -asequence pep-align/BSNT_04362___ytmP.1.5803.seq
#    -bsequence pep-align/BL00041___ytmP.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04362___ytmP-BL00041___ytmP.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04362___ytmP-BL00041___ytmP.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04362___ytmP
# 2: BL00041___ytmP
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 271
# Identity:     192/271 (70.8%)
# Similarity:   221/271 (81.5%)
# Gaps:           6/271 ( 2.2%)
# Score: 1057.0
# 
#
#=======================================

BSNT_04362___      1 ----MNWLGQLLGSDWEIFPAGGATGDAYYAKHNGQQLFLKRNSSPFLAV     46
                         ||||||||||:|||.||||||||||||:||||||||||||||||||
BL00041___ytm      1 MKIDMNWLGQLLGSEWEISPAGGATGDAYYAEHNGQQLFLKRNSSPFLAV     50

BSNT_04362___     47 LSAEGIVPKLVWTKRMENGDVITAQHWMTGRELKPKDMSGRPVAELLRKI     96
                     |||||||||||||||||||||||||||:.|||||||||:.:.|||:||||
BL00041___ytm     51 LSAEGIVPKLVWTKRMENGDVITAQHWLKGRELKPKDMNSQAVAEMLRKI    100

BSNT_04362___     97 HTSKALLDMLKRLGKEPLNPGALLSQLKQAVFAVQQSSPLIQEGIKYLEE    146
                     |:||.||||||||||:|..|.::::||||.:.|.|...|.:.:.:.|||.
BL00041___ytm    101 HSSKELLDMLKRLGKQPFQPSSVITQLKQFIQARQYPIPQLDQALLYLEH    150

BSNT_04362___    147 HLHEVHFGEKVVCHCDVNHNNWLLSEDNQLYLIDWDGAMIADPAMDLGPL    196
                     ||.:|..|||||||||||||||||::.|||||||||||||||||:|||||
BL00041___ytm    151 HLEDVQSGEKVVCHCDVNHNNWLLTDQNQLYLIDWDGAMIADPAIDLGPL    200

BSNT_04362___    197 LYHYVEKPAWESWLSMYGIELTESLRLRMAWYVLSETITFIAWHKAKGND    246
                     ||||||:..|.|||..||..||::||||||||||:|......|.|||||.
BL00041___ytm    201 LYHYVEEREWGSWLERYGSSLTDNLRLRMAWYVLAEKAMTTLWQKAKGNQ    250

BSNT_04362___    247 KEFHDAMEELHILMKRIVD--    265
                     :.||..:|:||.||:|:..  
BL00041___ytm    251 EGFHQGLEQLHELMERLARSS    271


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