Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04364 and BL00039

See DNA alignment / Visit BSNT_04364 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:31
# Commandline: needle
#    -asequence pep-align/BSNT_04364___ytlR.1.5803.seq
#    -bsequence pep-align/BL00039___ytlR.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04364___ytlR-BL00039___ytlR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04364___ytlR-BL00039___ytlR.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04364___ytlR
# 2: BL00039___ytlR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 309
# Identity:     158/309 (51.1%)
# Similarity:   212/309 (68.6%)
# Gaps:           3/309 ( 1.0%)
# Score: 827.5
# 
#
#=======================================

BSNT_04364___      1 MSHWFFIINPTAGHRNGLRVWKSIQKELIKRKVEHRSFLTEHPGHAEVLA     50
                     ||.|:.||||.||:....|.|||:||:|.|..:.:|||:|:|||||||||
BL00039___ytl      1 MSDWYIIINPKAGNSTAFRAWKSLQKDLQKANISYRSFMTQHPGHAEVLA     50

BSNT_04364___     51 RQISTIQEYKLKRLIVIGGDGTMHEVVNGLKDVDDIELSFVPAGAYNDFS    100
                     |||||:|:.:||||:|||||||:|||:|||..:.||:||.:|:|..|||.
BL00039___ytl     51 RQISTMQDDRLKRLLVIGGDGTVHEVLNGLVSLRDIQLSVIPSGISNDFK    100

BSNT_04364___    101 RGFSIKKIDLIQEIKKVKRPLTRTFHLGSVNFLQDKSQILYFMNHIGIGF    150
                     |||.:||.::|:|:|:..:.||||:.|||.: .:|....|||.||:.:||
BL00039___ytl    101 RGFGVKKSNVIKEMKRKGQSLTRTYALGSFH-TKDSENELYFANHLSLGF    149

BSNT_04364___    151 DAYVNKKAMEFPLRRVFLFLRLRFLVYPLSHLHASATFKPFTLACTTEDE    200
                     ||...||....|  :....|||..|::||.....:.|||||.|:....|:
BL00039___ytl    150 DACTAKKMSALP--KWTAALRLNHLIHPLIFFVTAFTFKPFVLSYENGDD    197

BSNT_04364___    201 TREFHDVWFAVVSNHPFYGGGMKAAPLANPREKTFDIVIVENQPFLKKYW    250
                     .|.|..:|||.|||||:||||||.||.||||::..|::|:|:.|.|||..
BL00039___ytl    198 KRTFKKIWFASVSNHPYYGGGMKIAPNANPRDELLDVIIIEDLPVLKKAG    247

BSNT_04364___    251 LLCLMAFGKHTKMDGVTMFKAKDITFYTKDKIPFHADGEFMGTTPFRLAS    300
                     ||..|.||||...:|||.||.|||.|:|.:::.|.||||.:|..|..:.:
BL00039___ytl    248 LLFAMIFGKHVGKNGVTAFKTKDIYFHTNERVLFQADGEVIGWAPVFIKT    297

BSNT_04364___    301 SPSPLRIKT    309
                     ....||::.
BL00039___ytl    298 GTESLRLRA    306


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