Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_04366 and BL00038

See DNA alignment / Visit BSNT_04366 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:31
# Commandline: needle
#    -asequence pep-align/BSNT_04366___ytlQ.1.5803.seq
#    -bsequence pep-align/BL00038___ytlQ.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04366___ytlQ-BL00038___ytlQ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04366___ytlQ-BL00038___ytlQ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04366___ytlQ
# 2: BL00038___ytlQ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 315
# Identity:     177/315 (56.2%)
# Similarity:   234/315 (74.3%)
# Gaps:          13/315 ( 4.1%)
# Score: 909.0
# 
#
#=======================================

BSNT_04366___      1 MAQIIKIHDYISRYELDPYHYINQFVRLKKERWLSLVEAAERQ----HEE     46
                     |||||||.|.|||||.|||||||||:||||:||.|:.|.||::    |.:
BL00038___ytl      1 MAQIIKIQDCISRYEQDPYHYINQFIRLKKQRWQSIKEMAEKKKESFHHD     50

BSNT_04366___     47 RQASAEEPEPVQKRKK-FSLKRRKEEIKADIQEERHQWF-----EDEEDI     90
                     :.|:.:  |...|||. |:|||:||....:..:|..:||     |.:|.:
BL00038___ytl     51 KGAAGD--ETFGKRKNTFTLKRKKEASDINKGKEADEWFNGLDGETDESL     98

BSNT_04366___     91 HVRLPKSRVALASFYKRHLYDFQLKWASSTLSEISQLSNQVKQDRILRYL    140
                     ..|:|.:...|..|:|.::|:|||||||||:|:||:||.::|.|:||..|
BL00038___ytl     99 IARIPAAGEELVPFFKEYVYEFQLKWASSTISDISRLSREIKSDKILHIL    148

BSNT_04366___    141 TQQLPDSYFIMYKPVLKIQQAAVELSIVIISPLEIYCVSFLEAEEDSVYI    190
                     .|||||||||||:|||::.|||||||::|::||||||:||||.|.||.:|
BL00038___ytl    149 AQQLPDSYFIMYRPVLQVNQAAVELSVLILTPLEIYCMSFLEGERDSAFI    198

BSNT_04366___    191 GSKNRFWDKKTA-SQTASVLNPGLSLFRTDSVVSKIVKEKQAEIPVRKLL    239
                     |||:|||.:||. .:..|:|||.:.|.||..|:|.::|....|:||||::
BL00038___ytl    199 GSKDRFWKEKTVRGKERSLLNPAVELLRTGKVLSGLLKGSGIELPVRKVI    248

BSNT_04366___    240 LSRTSYIDYPEPPYGLEIADKRSAEEWIERQKKNTAPIKHHQVKAAKALL    289
                     :||||||||||||||:.|.|||..:||:|:|:||.||||..|:|.||.||
BL00038___ytl    249 VSRTSYIDYPEPPYGIGICDKRHWKEWLEKQQKNFAPIKSQQLKTAKILL    298

BSNT_04366___    290 SYCMSDSYRRQEWLE    304
                     |:.:|||.||||||.
BL00038___ytl    299 SHGVSDSVRRQEWLS    313


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.