Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02915 and BL00036

See DNA alignment / Visit BSNT_02915 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:37
# Commandline: needle
#    -asequence pep-align/BSNT_02915.1.5803.seq
#    -bsequence pep-align/BL00036___yncE.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02915-BL00036___yncE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02915-BL00036___yncE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02915
# 2: BL00036___yncE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 157
# Identity:      32/157 (20.4%)
# Similarity:    47/157 (29.9%)
# Gaps:          89/157 (56.7%)
# Score: 171.0
# 
#
#=======================================

BSNT_02915         0 --------------------------------------------------      0
                                                                       
BL00036___ync      1 MSHKRGVLFEIPNGYGRFLLDILKPVEPADFNWLLADGECYLVENGELSD     50

BSNT_02915         1 ---------------------------------------MVNQVNTYEEF     11
                                                            ....|:|||.:
BL00036___ync     51 ENLFPQDPQVMTGEAFKKRLEDARYYLIFADLKAFPKDGHPEDVSTYESY    100

BSNT_02915        12 ADSDCELVLLIADNSYVSIYCKNKKFIEKLYFNALQNDFEDVQFITDEND     61
                     ..|.|||::|.||:|:|:||||::|.:|.||.||....|:.:::|||.||
BL00036___ync    101 MKSSCELIVLTADSSFVTIYCKDQKNLELLYQNAKDCGFKRIEYITDHND    150

BSNT_02915        62 TRTSLTV     68
                     .||.:.|
BL00036___ync    151 ARTGMHV    157


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