Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02915 and BL00036
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:37
# Commandline: needle
# -asequence dna-align/BSNT_02915.1.5803.seq
# -bsequence dna-align/BL00036___yncE.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02915-BL00036___yncE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02915-BL00036___yncE.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02915
# 2: BL00036___yncE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 505
# Identity: 129/505 (25.5%)
# Similarity: 129/505 (25.5%)
# Gaps: 329/505 (65.1%)
# Score: 283.0
#
#
#=======================================
BSNT_02915 0 -------------------------------------------------- 0
BL00036___ync 1 ATGAGTCATAAGCGAGGCGTTTTATTTGAAATCCCGAACGGGTACGGGCG 50
BSNT_02915 0 -------------------------------------------------- 0
BL00036___ync 51 CTTTCTTCTCGATATACTGAAGCCGGTTGAACCGGCCGATTTCAATTGGC 100
BSNT_02915 0 -------------------------------------------------- 0
BL00036___ync 101 TGCTTGCCGATGGCGAATGCTATCTCGTGGAAAACGGTGAATTGTCAGAT 150
BSNT_02915 0 -------------------------------------------------- 0
BL00036___ync 151 GAAAATCTTTTTCCTCAAGATCCGCAGGTGATGACAGGAGAAGCATTTAA 200
BSNT_02915 0 -------------------------------------------------- 0
BL00036___ync 201 AAAAAGGCTGGAAGACGCAAGGTACTATCTCATCTTCGCCGATCTGAAGG 250
BSNT_02915 1 ------------ATGGTTAATC------AAGTCAATACATATGAAGAGTT 32
|||| ..||| |.||||..|||||||||...|.
BL00036___ync 251 CTTTTCCGAAGGATGG-CCATCCCGAAGATGTCAGCACATATGAATCATA 299
BSNT_02915 33 T----------GCTGACAG-TGATTGCGAACTTGTCCTGTTGATAGCAGA 71
| ||||..|| |||||| ||.|.|.|||.||
BL00036___ync 300 TATGAAAAGCAGCTGCGAGCTGATTG-----------TGCTTACAGCCGA 338
BSNT_02915 72 TAATAGCTACGTTTCGATTTACTGTAAA-AACAAAAAA---------TTC 111
|...||.|..||..||||.|||||.||| |.||||||| |||
BL00036___ync 339 TTCGAGTTTTGTCACGATATACTGCAAAGATCAAAAAAACCTGGAGCTTC 388
BSNT_02915 112 -AT-TGAAAAACTTTACTTCAATGCTTTACAGAATG-ATTTTGAAGACG- 157
|| |.|||| |.|||.| ||.|| ..|||.||| ||
BL00036___ync 389 TATATCAAAA-------TGCAAAG-------GACTGCGGTTTCAAG-CGG 423
BSNT_02915 158 -TTCAATTTATCACTGATGAAAATGACACAAGAACAAGCCTTACTGTATG 206
||.|||.|||.||.|||.|.||.||..|.||||||.| |.||.|||
BL00036___ync 424 ATTGAATATATAACGGATCACAACGATGCCAGAACAGG----AATGCATG 469
BSNT_02915 207 A---- 207
.
BL00036___ync 470 TGTAG 474
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