Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04413 and BL00031

See DNA alignment / Visit BSNT_04413 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:35
# Commandline: needle
#    -asequence pep-align/BSNT_04413.1.5803.seq
#    -bsequence pep-align/BL00031___ytwF.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04413-BL00031___ytwF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04413-BL00031___ytwF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04413
# 2: BL00031___ytwF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 104
# Identity:      63/104 (60.6%)
# Similarity:    78/104 (75.0%)
# Gaps:           1/104 ( 1.0%)
# Score: 346.0
# 
#
#=======================================

BSNT_04413         1 MEIKEISTAALKEKIEADEELYLIDVREDEEVAEGMIPQAVHIRMGDIPE     50
                     |.|||||...||:::...|.|.:|||||||||||||||:||||:||||||
BL00031___ytw      1 MTIKEISPDELKDRLAKGETLNIIDVREDEEVAEGMIPEAVHIKMGDIPE     50

BSNT_04413        51 KMETLDKDKEYVFICRSGMRSMNVCKYLDEQGFKTVNVEGGMMAWEGETK    100
                     |::...||:.|:|:||||.||.|||.||.::||...|:.|||:.|.|.||
BL00031___ytw     51 KLDVFQKDQPYIFVCRSGKRSENVCLYLQDKGFDVTNMVGGMLEWTGNTK    100

BSNT_04413       101 PKN-    103
                     ||. 
BL00031___ytw    101 PKTK    104


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