Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_04395 and BL00021

See DNA alignment / Visit BSNT_04395 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:34
# Commandline: needle
#    -asequence pep-align/BSNT_04395___ytcP.1.5803.seq
#    -bsequence pep-align/BL00021___ytcP.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04395___ytcP-BL00021___ytcP.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04395___ytcP-BL00021___ytcP.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04395___ytcP
# 2: BL00021___ytcP
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 293
# Identity:     242/293 (82.6%)
# Similarity:   265/293 (90.4%)
# Gaps:          15/293 ( 5.1%)
# Score: 1251.0
# 
#
#=======================================

BSNT_04395___      1 MGAIAHSLKNRLFDMLIYGFLLMFALICVLPFIHVIAASFATVEEVVSKT     50
                                    :.|.||..|.|:|||||||||||||||||||:||.
BL00021___ytc      1 ---------------MNYSFLTGFGLVCVLPFIHVIAASFATVEEVISKK     35

BSNT_04395___     51 FILIPTTFSLDAYRYIFSTDIIYKSLLVSVFVTVIGTAVSMFLSSLMAYG    100
                     |||||||||||||||||||||:|:||:||:.||.:|||||||||||||||
BL00021___ytc     36 FILIPTTFSLDAYRYIFSTDIVYRSLIVSILVTAVGTAVSMFLSSLMAYG     85

BSNT_04395___    101 LSRRDLIGRQPLMFLVVFTMLFSGGMIPTFLVVKSLGLLDSYWALILPTA    150
                     |||::|:||:.|||||||||||||||||||||||||||||:||:||||||
BL00021___ytc     86 LSRKELMGRRVLMFLVVFTMLFSGGMIPTFLVVKSLGLLDTYWSLILPTA    135

BSNT_04395___    151 INAFNLIILKNFFQNIPSSLEESAKIDGCNDLGIFFKIVLPLSLPAIATI    200
                     |||||||||||||||||||||||||||||||:||||:|:|||||||||||
BL00021___ytc    136 INAFNLIILKNFFQNIPSSLEESAKIDGCNDIGIFFRIILPLSLPAIATI    185

BSNT_04395___    201 SLFYAVTYWNTYMTAILYLNDSAKWPIQVLLRQIVIVSSGMQGDMSEMGS    250
                     |||||||||||||.|||||:|:.||||||||||||||||||||||:|||:
BL00021___ytc    186 SLFYAVTYWNTYMQAILYLSDATKWPIQVLLRQIVIVSSGMQGDMTEMGA    235

BSNT_04395___    251 GSPPPEQTIKMAVIVVATIPVLLVYPFIQKHFAKGALLGSVKG    293
                     .:.|||||||||||||||||||||||||||||||||||||:||
BL00021___ytc    236 AAAPPEQTIKMAVIVVATIPVLLVYPFIQKHFAKGALLGSIKG    278


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.