Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04395 and BL00021
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:34
# Commandline: needle
# -asequence dna-align/BSNT_04395___ytcP.1.5803.seq
# -bsequence dna-align/BL00021___ytcP.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04395___ytcP-BL00021___ytcP.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04395___ytcP-BL00021___ytcP.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04395___ytcP
# 2: BL00021___ytcP
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 893
# Identity: 642/893 (71.9%)
# Similarity: 642/893 (71.9%)
# Gaps: 67/893 ( 7.5%)
# Score: 2383.0
#
#
#=======================================
BSNT_04395___ 1 GTGGGAGCTATCGCACATTCACTGAAAAACCGTCTGTTTGATATGTTGAT 50
||||..|.||.||
BL00021___ytc 1 -------------------------------------TTGAATTATTCAT 13
BSNT_04395___ 51 TTAT----GGTTTCTTGCTGATGTTCGCTTTAATATGCGTACTTCCGTTC 96
||.| || |||||..||..|.||.||.||.||||||
BL00021___ytc 14 TTTTAACAGG------------GTTCGGATTGGTTTGTGTGCTGCCGTTC 51
BSNT_04395___ 97 ATTCATGTCATCGCAGCATCTTTCGCCACAGTAGAAGAAGTCGTGTCGAA 146
||.||.||.||.|||||.|||||.||.|||||.||.||.||..|.|||||
BL00021___ytc 52 ATCCACGTTATTGCAGCCTCTTTTGCGACAGTCGAGGAGGTTATTTCGAA 101
BSNT_04395___ 147 AACATTTATTTTAATACCGACCACTTTTTCGCTAGATGCTTATCGCTACA 196
||..|||||||||||||||||.|||||||||||.|||||.||..|.||.|
BL00021___ytc 102 AAAGTTTATTTTAATACCGACGACTTTTTCGCTGGATGCGTACAGGTATA 151
BSNT_04395___ 197 TTTTTTCAACAGATATTATTTATAAGAGTTTGCTTGTTTCTGTGTTTGTG 246
||||||||||.||.|||.|.||.|.|||.||..|.||||||.|..||||.
BL00021___ytc 152 TTTTTTCAACTGACATTGTGTACAGGAGCTTAATCGTTTCTATTCTTGTC 201
BSNT_04395___ 247 ACAGTGATAGGCACTGCGGTCAGCATGTTTCTTTCTTCACTGATGGCTTA 296
||||...||||.||.||||||||||||||||||||.||..|.|||||.||
BL00021___ytc 202 ACAGCCGTAGGGACGGCGGTCAGCATGTTTCTTTCCTCTTTAATGGCATA 251
BSNT_04395___ 297 CGGGTTATCCCGCCGTGATTTAATCGGCCGGCAGCCG--CTCATGTTTCT 344
||||.|.||..|....||..|.||.||..||| .|| ||.|||||..|
BL00021___ytc 252 CGGGCTGTCGAGAAAGGAGCTGATGGGAAGGC--GCGTCCTGATGTTCTT 299
BSNT_04395___ 345 CGTCGTATTTACGATGCTGTTTAGCGGCGGCATGATTCCGACTTTCCTTG 394
.|||||.||.|||||||||||.|||||.||.|||||.|||||.||.||.|
BL00021___ytc 300 GGTCGTGTTCACGATGCTGTTCAGCGGAGGGATGATCCCGACCTTTCTCG 349
BSNT_04395___ 395 TGGTCAAATCGCTTGGATTGCTCGATTCTTACTGGGCGCTTATTTTGCCG 444
|.||.||||||||.||||||||||||.|.||.|||.|.||.|||.|.|||
BL00021___ytc 350 TCGTAAAATCGCTCGGATTGCTCGATACCTATTGGTCTCTGATTCTTCCG 399
BSNT_04395___ 445 ACAGCCATTAATGCCTTTAACCTGATCATTCTGAAAAACTTCTTTCAAAA 494
||.|||||.|||||.||||||.||||.|||.|.||.|||||.||||||||
BL00021___ytc 400 ACCGCCATCAATGCGTTTAACTTGATTATTTTAAAGAACTTTTTTCAAAA 449
BSNT_04395___ 495 TATCCCGTCAAGCCTGGAAGAGTCCGCGAAAATTGACGGGTGCAATGATC 544
.||.|||||||||||.||.||.|||||.|||||.|||||.||||||||..
BL00021___ytc 450 CATACCGTCAAGCCTCGAGGAATCCGCCAAAATCGACGGCTGCAATGACA 499
BSNT_04395___ 545 TGGGCATATTCTTTAAAATTGTGCTGCCGCTGTCTCTTCCTGCGATCGCA 594
|.|||||.|||||....||..|.||.|||.|||||.|.||.||||||||.
BL00021___ytc 500 TCGGCATCTTCTTCCGCATCATTCTTCCGTTGTCTTTGCCGGCGATCGCG 549
BSNT_04395___ 595 ACGATTTCACTATTTTATGCGGTCACGTATTGGAACACGTATATGACA-G 643
||||||||.||.|||||.||.|||||.||||||||.|||||.||| || |
BL00021___ytc 550 ACGATTTCGCTGTTTTACGCCGTCACCTATTGGAATACGTACATG-CAGG 598
BSNT_04395___ 644 CGATCTTGTACTTAAACGATTCAGCAAAATGGCCGATTCAGGTGCTTCTG 693
||||..|||||||.|.||||.|..|||||||||||||.||.||..|.||.
BL00021___ytc 599 CGATTCTGTACTTGAGCGATGCGACAAAATGGCCGATACAAGTTTTGCTT 648
BSNT_04395___ 694 CGCCAAATCGTCATTGTATCAAGCGGTATGCAGGGGGATATGTCTGAAAT 743
|||||.||.|||||.|||||||||||||||||.|||||||||.|.|||||
BL00021___ytc 649 CGCCAGATTGTCATCGTATCAAGCGGTATGCAAGGGGATATGACGGAAAT 698
BSNT_04395___ 744 GGGGTCGGGCAGCC----CGCCGCCTGAGCAAACCATTAAAATGGCGGTC 789
|| |.|||||| |||||||.||.|||||.||.||||||||||||
BL00021___ytc 699 GG----GAGCAGCCGCGGCGCCGCCGGAACAAACGATCAAAATGGCGGTC 744
BSNT_04395___ 790 ATAGTGGTGGCGACCATCCCGGTTCTGCTTGTCTATCCGTTTATACAAAA 839
||.||.||.||.|||||.||.||.|||||.||.|||||||||||.|||||
BL00021___ytc 745 ATTGTCGTTGCAACCATACCTGTGCTGCTCGTGTATCCGTTTATTCAAAA 794
BSNT_04395___ 840 GCATTTTGCAAAAGGAGCTTTGCTGGGATCTGTCAAAGGATAA 882
.||.|||||||||||.|||.|..|.||.||..|.|||||||||
BL00021___ytc 795 ACACTTTGCAAAAGGCGCTCTTTTAGGGTCAATTAAAGGATAA 837
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