Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04396 and BL00020

See DNA alignment / Visit BSNT_04396 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:34
# Commandline: needle
#    -asequence pep-align/BSNT_04396.1.5803.seq
#    -bsequence pep-align/BL00020___ytbQ.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04396-BL00020___ytbQ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04396-BL00020___ytbQ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04396
# 2: BL00020___ytbQ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 258
# Identity:     153/258 (59.3%)
# Similarity:   201/258 (77.9%)
# Gaps:           9/258 ( 3.5%)
# Score: 785.0
# 
#
#=======================================

BSNT_04396         1 MKKVLIAGGNGVIGRLLAEGLISD-YEVTVLDKDHFDGKAS--SIQADAA     47
                     ||||.|.||||.:||:||.||..: |||||||....|.|.:  .|:.||.
BL00020___ytb      1 MKKVTIVGGNGTVGRVLAGGLAGEGYEVTVLDLKEPDDKQAVRFIRVDAT     50

BSNT_04396        48 NYEELLKKIPKDTDAILNLLAVKIKYDIMDIAEFEKMTDVFYRASYYLCR     97
                     :|.|::|.||..|:|::||||||...|::|..||.||||:|::|:|.:.|
BL00020___ytb     51 DYNEVVKSIPAQTNALINLLAVKPSGDLLDRQEFAKMTDIFFKATYTILR    100

BSNT_04396        98 AAAEIGIQKLVFASSNHVTDLYEKDGRSLLGREITTSDYPLSKNLYGVLK    147
                     ||||:|:.|:||||||||||:|||.|.|||||:|.|:|||.||:|||:||
BL00020___ytb    101 AAAELGVPKVVFASSNHVTDVYEKGGDSLLGRQINTNDYPQSKSLYGLLK    150

BSNT_04396       148 LSSEQIGHLF--YLENKLSVINLRIGTVVTDEMDTLHEKERTKKTLLSHP    195
                     |:||.:|:||  .|:.|:|||||||||...:|::|||.|.|:||||||||
BL00020___ytb    151 LASENLGYLFSHQLDAKVSVINLRIGTAAENELETLHAKPRSKKTLLSHP    200

BSNT_04396       196 DLLSIFKAAIETNIRYGTYYAVSDNPGRPWSIESAVNELGFSPQINTAEL    245
                     ||:.||||||::...||||||||||.||||||:||:.|||:.||::.:::
BL00020___ytb    201 DLIGIFKAAIKSGKTYGTYYAVSDNKGRPWSIDSAIRELGYRPQVSASDI    250

BSNT_04396       246 LNEEENGA    253
                     |:|:    
BL00020___ytb    251 LDED----    254


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