Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_06210 and BL00017

See DNA alignment / Visit BSNT_06210 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:10
# Commandline: needle
#    -asequence pep-align/BSNT_06210___yycE.1.5803.seq
#    -bsequence pep-align/BL00017___yycE.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_06210___yycE-BL00017___yycE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_06210___yycE-BL00017___yycE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06210___yycE
# 2: BL00017___yycE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 139
# Identity:      78/139 (56.1%)
# Similarity:   100/139 (71.9%)
# Gaps:           5/139 ( 3.6%)
# Score: 444.0
# 
#
#=======================================

BSNT_06210___      1 MGKGFSSFHAAQIRIARPTGQLDEIIRFYEEGLCLKRIGEFSKHNGYDGV     50
                       ..||.|.|.|:||||||.:.|||:.|||:||.||::|.||.|:||:||
BL00017___yyc      1 --MHFSDFSAVQVRIARPTDRFDEIVAFYEKGLGLKKLGGFSGHHGYNGV     48

BSNT_06210___     51 MFGLPHADYHLEFTQYEGGSTAPVPHPDSLLVFYVPNADELAAITSKLKH    100
                     |||||:..||||||.:..||..|.|..|:|||||:|:.:|:.:|.::|..
BL00017___yyc     49 MFGLPNVQYHLEFTSHIEGSPCPAPTKDNLLVFYIPDPEEIRSILNRLAD     98

BSNT_06210___    101 MGYQEVESENPYWSNGGVTIEDPDGWRVVFMNSKGISDK    139
                     |||.||..|||||...|.|:|||||||:|.||::||   
BL00017___yyc     99 MGYDEVPPENPYWKEKGATVEDPDGWRIVLMNTEGI---    134


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