Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04431 and BL00012
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:37
# Commandline: needle
# -asequence pep-align/BSNT_04431___ytrF.1.5803.seq
# -bsequence pep-align/BL00012___ytrF.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04431___ytrF-BL00012___ytrF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04431___ytrF-BL00012___ytrF.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04431___ytrF
# 2: BL00012___ytrF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 446
# Identity: 272/446 (61.0%)
# Similarity: 356/446 (79.8%)
# Gaps: 13/446 ( 2.9%)
# Score: 1375.5
#
#
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BSNT_04431___ 1 MRFKDQVHFIRRNMKKNRLRVFMTILATTMAYAFLVVLSSVGFGIQKTIT 50
|:||||:.||||||:||||||||||||||:|.|||:||:|||||:||::|
BL00012___ytr 1 MKFKDQLKFIRRNMRKNRLRVFMTILATTVACAFLIVLASVGFGLQKSMT 50
BSNT_04431___ 51 DMTMSQQIVTKVSVMGKEG--DKPIKKADLEKYDH---VRSVVERTQMYE 95
:..|.:||||:::|:|||| |:.::|.||::::: |.:::|||.::.
BL00012___ytr 51 EQLMKEQIVTEINVVGKEGQSDQKVQKKDLKEFENRKDVSAIIERTNVFA 100
BSNT_04431___ 96 PNKATLGNRT-NESSNLIFTNMNDELKANMELEKGRVAKSENEIVVGYDF 144
|.:|.||||| |:.||:..|:|..|.|||::|::|||||:.|||||||.|
BL00012___ytr 101 PAEAKLGNRTNNQMSNITITDMAAEQKANIKLDRGRVAKTPNEIVVGYHF 150
BSNT_04431___ 145 AKRLLTKKESEEYNKKIEEAKGNPEDIKEPKGYTKDILNKTIELSVSKTD 194
.|.|.||||:.:|.|::| .|.|:.||||||.:|||.|||||.:||.|
BL00012___ytr 151 GKNLWTKKEAADYEKQME---NNAEEAKEPKGYEEDILGKTIELKISKMD 197
BSNT_04431___ 195 PKTGDVTKTKTYDFKIVGITKKPSQDWMEDSNIFISDQFKKDFSEFL--D 242
.|||:..:.||||.|:||:|||||.:|..||.:::|:..:||.:.|| :
BL00012___ytr 198 EKTGEEGEAKTYDLKVVGVTKKPSYEWASDSTVYVSNGMQKDITGFLKSE 247
BSNT_04431___ 243 FKGGNVETNIGVFADKFENVEQLTNDLTDDGYYVTSVTTELEGANTFFMV 292
...|.:|..:.|:||.||:|.|||.||.|:||||.|:|.:|:..|.|||.
BL00012___ytr 248 KDSGMIEKTLSVYADNFEHVGQLTTDLEDEGYYVDSITKKLDSINLFFMA 297
BSNT_04431___ 293 FKIGLIFVGCIAVIISAIGIFNTMTMAVTERTQEIGIMKAIGASPSIIRR 342
|||||||||.|||.|||||||||||||||||||||||||||||||::||:
BL00012___ytr 298 FKIGLIFVGVIAVFISAIGIFNTMTMAVTERTQEIGIMKAIGASPNVIRK 347
BSNT_04431___ 343 MFLMESAYIGILGCVIGIIISYGVSYLVNLAVPMILAATSGSD--AGDLN 390
|||:|||||||||.|:|||||||||:|||..:|:||::.|..: |.:|:
BL00012___ytr 348 MFLLESAYIGILGSVLGIIISYGVSFLVNKIIPVILSSVSEGEASAAELS 397
BSNT_04431___ 391 YTFSYIPASLVIIAVVICGGVAVISGMNPARKATKTNVLTALRREL 436
.|||:||.|||:||.:|..|||::||:|||.|||:|||||||||||
BL00012___ytr 398 ITFSHIPVSLVLIATLISAGVAILSGLNPAIKATRTNVLTALRREL 443
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