Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04434 and BL00010
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:37
# Commandline: needle
# -asequence pep-align/BSNT_04434___ytrC.1.5803.seq
# -bsequence pep-align/BL00010___ytrC.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04434___ytrC-BL00010___ytrC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04434___ytrC-BL00010___ytrC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04434___ytrC
# 2: BL00010___ytrC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 335
# Identity: 157/335 (46.9%)
# Similarity: 213/335 (63.6%)
# Gaps: 17/335 ( 5.1%)
# Score: 750.5
#
#
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BSNT_04434___ 1 MVDRGLLYREWKQNQVVILLSIVFLVLANPLTIYHSYSLNEACLAHSDPK 50
||||||||:||||:..:.|:....::|:.||.|.:.|...:.||| ...|
BL00010___ytr 1 MVDRGLLYKEWKQHFWIFLVVFAAVLLSEPLAILNDYFQYQGCLA-EQKK 49
BSNT_04434___ 51 F----CTFFVDYHIDSLIQINWVIGIILAVCLIGLERSRGTMDFLLGLPY 96
| |..:.||.:...:::.||.|:.||:..||.||||||:||.|||||
BL00010___ytr 50 FPDIECVLYKDYGVSGAMRMFWVGGVALAISQIGFERSRGTLDFTLGLPY 99
BSNT_04434___ 97 KRNQIFQTKFWLGAVVIVFSQLVGFFLAWLLILFLKPEQVNFFEHGSIGV 146
||..||.||::.|..:::.:||:.:.|::.||:....:.| ||....||.
BL00010___ytr 100 KRGVIFNTKYFFGISILLTAQLLSYLLSYALIILYNVDVV-FFHEYFIGA 148
BSNT_04434___ 147 MITSIMFYSLVMAAGTLAGNAFAQLLTAFATSVLPYLIIVLPFSNIEIIS 196
:|...|.||||||||.:.||..||::.||:.|:||||:|.||.:|:.||.
BL00010___ytr 149 VIFCFMVYSLVMAAGAMTGNPLAQMIVAFSASILPYLLIGLPLANLRIIL 198
BSNT_04434___ 197 GVQIWKLFPNIEYYFDFENNLMDF-SPIAYVDSSWVAE-SKYLLLIPAVM 244
| .|.:...:|..|..|:|: :||.|::|..:.: |....|||..|
BL00010___ytr 199 G-----FFGHDPAFFYGETELLDYITPIIYLNSFGIQDGSLAFTLIPLAM 243
BSNT_04434___ 245 SILFYFIGYISFIKHHNERNGYFFLWKTLDRPIQILVIVLGILGFGIVGH 294
.||||.|||..|||...||||:||||:.:|||||||||:.||.|||.
BL00010___ytr 244 GILFYIIGYFCFIKQQLERNGHFFLWRKMDRPIQILVILFGIWGFGT--- 290
BSNT_04434___ 295 SAGESIAGYIIGMIIGGIVGFLISYFSIFKKVRH- 328
:|..|:..||.||:||..||||||||.||||::.
BL00010___ytr 291 AAASSLFSYIFGMLIGSAVGFLISYFLIFKKIKQL 325
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