Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04437 and BL00008

See DNA alignment / Visit BSNT_04437 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:37
# Commandline: needle
#    -asequence pep-align/BSNT_04437___ytrA.1.5803.seq
#    -bsequence pep-align/BL00008___ytrA.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04437___ytrA-BL00008___ytrA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04437___ytrA-BL00008___ytrA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04437___ytrA
# 2: BL00008___ytrA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 130
# Identity:     112/130 (86.2%)
# Similarity:   121/130 (93.1%)
# Gaps:           0/130 ( 0.0%)
# Score: 574.0
# 
#
#=======================================

BSNT_04437___      1 MIQIDPRSSTPIYEQIIQQMKELCLKGIMKPGDKLPSVRELATIIIANPN     50
                     ||||||||||||||||||||||||||||:|||||||||||||||||||||
BL00008___ytr      1 MIQIDPRSSTPIYEQIIQQMKELCLKGIIKPGDKLPSVRELATIIIANPN     50

BSNT_04437___     51 TVSKAYKELEREGIIETLRGRGTYISENAKTTLVEGKMTMIKEQLKQLII    100
                     ||||||||||||||||||||||||||||||.||.|||:.|||||||||||
BL00008___ytr     51 TVSKAYKELEREGIIETLRGRGTYISENAKVTLDEGKIAMIKEQLKQLII    100

BSNT_04437___    101 DAHYAGVELEKLHEWIKEISADVKGGKKND    130
                     ||||||::.:||.||:.||..:|:||:.||
BL00008___ytr    101 DAHYAGIDTKKLQEWMAEIDEEVRGGEVND    130


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