Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04437 and BL00008
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:37
# Commandline: needle
# -asequence dna-align/BSNT_04437___ytrA.1.5803.seq
# -bsequence dna-align/BL00008___ytrA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04437___ytrA-BL00008___ytrA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04437___ytrA-BL00008___ytrA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04437___ytrA
# 2: BL00008___ytrA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 394
# Identity: 311/394 (78.9%)
# Similarity: 311/394 (78.9%)
# Gaps: 2/394 ( 0.5%)
# Score: 1211.0
#
#
#=======================================
BSNT_04437___ 1 ATGATTCAAATCGATCCAAGAAGCTCAACACCCATTTACGAACAAATTAT 50
|||||||||||||||||.|||||||||||.||.||.||.||.||.||.||
BL00008___ytr 1 ATGATTCAAATCGATCCGAGAAGCTCAACCCCAATCTATGAGCAGATCAT 50
BSNT_04437___ 51 TCAGCAAATGAAAGAGCTTTGTTTGAAAGGGATCATGAAGCCTGGTGATA 100
.|||||.|||||||||||.||.||.||||||||.||.||||||||.||||
BL00008___ytr 51 CCAGCAGATGAAAGAGCTGTGCTTAAAAGGGATAATCAAGCCTGGAGATA 100
BSNT_04437___ 101 AGCTTCCTTCTGTCAGAGAATTGGCGACGATCATTATTGCGAATCCGAAC 150
|.|||||||||||||||||..|.||.||.||.||.|||||.||.|||||.
BL00008___ytr 101 AACTTCCTTCTGTCAGAGAGCTTGCAACCATTATCATTGCAAACCCGAAT 150
BSNT_04437___ 151 ACTGTCAGCAAAGCGTATAAAGAGCTTGAGCGAGAGGGGATTATTGAAAC 200
||.|||||||||||.||||||||.|||||.||.||.||||||||||||||
BL00008___ytr 151 ACGGTCAGCAAAGCCTATAAAGAACTTGAACGGGAAGGGATTATTGAAAC 200
BSNT_04437___ 201 GCTGCGGGGCAGAGGGACCTATATATCGGAGAATGCAAAAACGACACTGG 250
|.||.||||.|||||.||.|||||.||.||.||.||.|||...||.||.|
BL00008___ytr 201 GTTGAGGGGAAGAGGAACGTATATTTCAGAAAACGCGAAAGTTACGCTTG 250
BSNT_04437___ 251 TTGAAGGGAAGATGACGATGATTAAAGAGCAACTCAAACAGCTCATCATC 300
.||||||||||||..||||||||||||||||..|.||.|||||.||||||
BL00008___ytr 251 ATGAAGGGAAGATTGCGATGATTAAAGAGCAGTTAAAGCAGCTGATCATC 300
BSNT_04437___ 301 GATGCACACTATGCAGGGGTTGAGCTGGAAAAA-CTGCACGAATGGATAA 349
|||||.||.||.||.|||.|.|| |...||||| |||||.||.|||||..
BL00008___ytr 301 GATGCGCATTACGCGGGGATCGA-CACCAAAAAGCTGCAGGAGTGGATGG 349
BSNT_04437___ 350 AGGAAATCAGCGCTGATGTGAAGGGAGGCAAAAAAAATGATTGA 393
.|||||||..||..||.||||..||||||.||...|||||||||
BL00008___ytr 350 CGGAAATCGACGAAGAAGTGAGAGGAGGCGAAGTGAATGATTGA 393
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