Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04444 and BL00003

See DNA alignment / Visit BSNT_04444 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:38
# Commandline: needle
#    -asequence pep-align/BSNT_04444___ytpA.1.5803.seq
#    -bsequence pep-align/BL00003___ytpA.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04444___ytpA-BL00003___ytpA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04444___ytpA-BL00003___ytpA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04444___ytpA
# 2: BL00003___ytpA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 260
# Identity:     191/260 (73.5%)
# Similarity:   227/260 (87.3%)
# Gaps:           2/260 ( 0.8%)
# Score: 1051.0
# 
#
#=======================================

BSNT_04444___      1 MWTWKADRPVAVIVIIHGASEYHGRYKWLIEMWRSSGYHVVMGDLPGQGT     50
                     ||..:|:||||.||:||||.|:|||||||.|||||||::|||||||||||
BL00003___ytp      1 MWCMEAERPVATIVVIHGACEHHGRYKWLSEMWRSSGFNVVMGDLPGQGT     50

BSNT_04444___     51 TTRARGHIRSFQEYIDEVDAWIDKARTFDLPVFLLGHSMGGLVAIEWVKQ    100
                     :||.|||||||||||||||.|:.:|:.|:||||:||||||||:||||.||
BL00003___ytp     51 STRERGHIRSFQEYIDEVDKWVARAKAFELPVFMLGHSMGGLIAIEWFKQ    100

BSNT_04444___    101 QRNPRITGIILSSPCLGLQIKVNKALDLASKGLNVIAPSLKVDSGLSIDM    150
                     |:: .|.|:||||||||||:|.||.|||.||||||:|||::.:||::.|.
BL00003___ytp    101 QQS-GIAGLILSSPCLGLQLKPNKFLDLISKGLNVLAPSMRFESGITPDK    149

BSNT_04444___    151 ATRNEDVIEADQNDSLYVRKVSVRWYRELLKTIESAMVPTEAFLKVPLLV    200
                     ||||::|||.|.|||||:.|||||||:|:||.::|||.||:|||.:||.|
BL00003___ytp    150 ATRNKEVIEMDINDSLYITKVSVRWYQEMLKALKSAMEPTDAFLNIPLFV    199

BSNT_04444___    201 MQAGDDKLVDKTMVIKWFNGVASHNKAYREWEGLYHEIFNEPEREDVFKA    250
                     ||||.|.||||.||:||||.:|||||.||||:||||||||||||||||||
BL00003___ytp    200 MQAGTDWLVDKKMVVKWFNQLASHNKTYREWDGLYHEIFNEPEREDVFKA    249

BSNT_04444___    251 ARAFTDQYI-    259
                     ||||.:||| 
BL00003___ytp    250 ARAFAEQYIT    259


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