Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_06231 and RBAM_037620
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:41
# Commandline: needle
# -asequence dna-align/BSNT_06231___yybR.1.9828.seq
# -bsequence dna-align/RBAM_037620___yybR.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_06231___yybR-RBAM_037620___yybR.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06231___yybR-RBAM_037620___yybR.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06231___yybR
# 2: RBAM_037620___yybR
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 389
# Identity: 285/389 (73.3%)
# Similarity: 285/389 (73.3%)
# Gaps: 28/389 ( 7.2%)
# Score: 1065.5
#
#
#=======================================
BSNT_06231___ 1 ATGAGTGGAAAAAAGAATATATACCCGAACAAAGAAGGCTGTCCAGTTGA 50
|.|||.|||||.|||||.||||||||.|||||.|||||
RBAM_037620__ 1 ------------ATGAACATATATCCGAATAAAGAAGGTTGTCCGGTTGA 38
BSNT_06231___ 51 ATTTACTCTAGATGTCATTGGCGGAAAGTGGAAAGGAATTCTTTTTTATC 100
|.|.||.||....||.||.||||||||||||||.||.|||.|.|||||||
RBAM_037620__ 39 ACTGACGCTTTCCGTTATCGGCGGAAAGTGGAAGGGTATTTTGTTTTATC 88
BSNT_06231___ 101 ACATGATAGATGGCAAGAAACGATTTAATGAGTTTCGGCGAATCTGCCCG 150
|.|||||.|..||.||.||.||.|||||||||||||||||.||.|||||.
RBAM_037620__ 89 ATATGATCGGCGGAAAAAAGCGGTTTAATGAGTTTCGGCGCATTTGCCCC 138
BSNT_06231___ 151 AGTATTACTCAAAGAATGCTTACTCTTCAGCTGAGGGAGCTGGAAGCGGA 200
||.|||||.||..|.|||||.||.||||||||..|.|||||.||.|||||
RBAM_037620__ 139 AGCATTACGCAGCGTATGCTGACGCTTCAGCTTCGCGAGCTTGAGGCGGA 188
BSNT_06231___ 201 CGGCATCGTGCATCGTGAGGTTTATCAACAGGTGCCGCCCAAGGTTGAGT 250
|||||||||||||||.|||||.|||||.||||||||.||.|||||.||||
RBAM_037620__ 189 CGGCATCGTGCATCGCGAGGTATATCAGCAGGTGCCTCCAAAGGTGGAGT 238
BSNT_06231___ 251 ACTCTCTGACGGAATTCGGGCGAACGCTTGAACCGATTGTTTTGCAAATG 300
|.|||||.||.||||||||..|..||||.||||||||.||||||||||||
RBAM_037620__ 239 ATTCTCTTACCGAATTCGGCAGGTCGCTGGAACCGATCGTTTTGCAAATG 288
BSNT_06231___ 301 AAAGAATGGGGAGAATCCAACAGAGACGTGCTGGAATCTTATCGTTCG-- 348
||..||||||||||..|||||.|.||..|.||.||..|.||.|| |
RBAM_037620__ 289 AAGAAATGGGGAGATGCCAACCGGGAGTTTCTCGAGGCATACCG---GGA 335
BSNT_06231___ 349 ---AACGGCTTACTGAAGGATCAG------CAGAAATAG 378
||||.| |.||.|| |||||| ||.|||||.
RBAM_037620__ 336 AAAAACGTC-TCCTCAA-GATCAGTCCGCTCAAAAATAA 372
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