Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_06180 and RBAM_037210
See
Amino acid alignment /
Visit
BSNT_06180 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:38
# Commandline: needle
# -asequence dna-align/BSNT_06180___yycN.1.9828.seq
# -bsequence dna-align/RBAM_037210___yycN.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_06180___yycN-RBAM_037210___yycN.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06180___yycN-RBAM_037210___yycN.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06180___yycN
# 2: RBAM_037210___yycN
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 479
# Identity: 343/479 (71.6%)
# Similarity: 343/479 (71.6%)
# Gaps: 13/479 ( 2.7%)
# Score: 1142.0
#
#
#=======================================
BSNT_06180___ 1 ATGACAATCATGCTGACCCCAATG-CAGTCAGAAGAATTTCGGTCTTATC 49
|||.|.||||.||||...||.||| ||| .|.|||||||||.|||.||||
RBAM_037210__ 1 ATGGCTATCACGCTGCGGCCGATGACAG-GACAAGAATTTCAGTCCTATC 49
BSNT_06180___ 50 TCACATACACAACAAAGCATTACGCGGAAGAAAAGGTAAAAGCGGGAACA 99
||.|..|..||||.||||||||||..|||||||||||||||||||||||.
RBAM_037210__ 50 TCGCTCATTCAACCAAGCATTACGGTGAAGAAAAGGTAAAAGCGGGAACG 99
BSNT_06180___ 100 TGGCTGCCTGAAGATGCACAGCTTTTGTCTAAGCAGGCGTTTACTGATCT 149
|||||||||||.||.||.|.|...||..|..|||.|||||||...||.||
RBAM_037210__ 100 TGGCTGCCTGACGAAGCGCCGGAATTAGCGGAGCTGGCGTTTGAAGACCT 149
BSNT_06180___ 150 GCTTCCGAGAGGGC-TGGAAACACCCCATCACCATTTGTGGAGCCTCAAG 198
|||||| .||.||| ||||.||..||.|||||.||||.||||..||.|..
RBAM_037210__ 150 GCTTCC-TGACGGCTTGGAGACGGCCGATCACTATTTATGGACGCTGACA 198
BSNT_06180___ 199 CTGAATGAAAAGGATACCGTTGGCTGGCTCTGGATACATGCTGAACCGGA 248
.||.|.|.||||||.|..|..||||||||.|||.|.||.||.||.|||||
RBAM_037210__ 199 TTGGACGGAAAGGAAAATGCCGGCTGGCTGTGGCTGCACGCCGATCCGGA 248
BSNT_06180___ 249 GCATCCGCAGCAGGAAGCGTTTATTTATGATTTCGGGTTATATGAACCGT 298
.||.|||||||||||.||||||||||||||||||||..|..||...||.|
RBAM_037210__ 249 CCACCCGCAGCAGGACGCGTTTATTTATGATTTCGGCCTTCATCCGCCTT 298
BSNT_06180___ 299 ATCGGGGAAAGGGCTACGCAAAGCAAGCATTGGCA--GCATTAGATCATA 346
..||.||.||.|||||.|||||..|.||..|.||| || |.||..|.|
RBAM_037210__ 299 TCCGCGGCAAAGGCTATGCAAAAGAGGCGCTCGCAAGGC--TGGAGGACA 346
BSNT_06180___ 347 CGGCACGCAG-CATGGGAATCCGCAAGCTGTCCCTTCATGTCTTTGCTCA 395
..|| |..|| |.||||..||||||||.|.||.||.|||||.||.|||||
RBAM_037210__ 347 AAGC-CAAAGACCTGGGTGTCCGCAAGATTTCTCTCCATGTGTTCGCTCA 395
BSNT_06180___ 396 TAATCAGACGGCGCGAAAGCTATATGAGCAAACCGGATTTCAAGAAACAG 445
|||..|.||||||||.|||||.||||||.|.||||||||||..||.||.|
RBAM_037210__ 396 TAACGAAACGGCGCGGAAGCTGTATGAGAAGACCGGATTTCTGGAGACGG 445
BSNT_06180___ 446 ACGTAGTGATGAGCAAGAAGATTTAA--- 471
|.||..|.||||||||.|||.|.|.|
RBAM_037210__ 446 ATGTCATCATGAGCAAAAAGCTGTCATGA 474
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.