Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05787 and RBAM_035060
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:17
# Commandline: needle
# -asequence dna-align/BSNT_05787___spsL.1.9828.seq
# -bsequence dna-align/RBAM_035060___spsL.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05787___spsL-RBAM_035060___spsL.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05787___spsL-RBAM_035060___spsL.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05787___spsL
# 2: RBAM_035060___spsL
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 464
# Identity: 360/464 (77.6%)
# Similarity: 360/464 (77.6%)
# Gaps: 10/464 ( 2.2%)
# Score: 1403.0
#
#
#=======================================
BSNT_05787___ 1 ------GTGATTGATGGAGTCAAGGTGAAAAAATTGATGAAGCATAGCGA 44
|||||.||.||.||.||.||.|||||..||||.||.||.|||||
RBAM_035060__ 1 GTGCAAGTGATCGAAGGCGTAAAAGTCAAAAAGCTGATCAAACACAGCGA 50
BSNT_05787___ 45 TGACAGAGGCTTTTTTGCTGAGCTGGTCCGGGACGATGAGAATCTCCTTG 94
||||.|.||.|||||..|.||.||.|||||.||||||||..|||||.|.|
RBAM_035060__ 51 TGACCGGGGTTTTTTCTCAGAACTCGTCCGTGACGATGAACATCTCTTAG 100
BSNT_05787___ 95 AGCATTTTGGGCAGGCCTCTTGGTCGAAAAGCTATCCGGGTGTGATTAAG 144
|||.|||.||||||||.||.|||||.|||||||||||.||.||.|||||.
RBAM_035060__ 101 AGCGTTTCGGGCAGGCTTCCTGGTCCAAAAGCTATCCCGGCGTCATTAAA 150
BSNT_05787___ 145 GCATTTCATTATCATGAGAAGCAGGATGATCTCTGGTTCTTCCCAACCGG 194
||||||||.|||||||||||.||||||||.||.|||||.||.||.||.||
RBAM_035060__ 151 GCATTTCACTATCATGAGAAACAGGATGACCTATGGTTTTTTCCGACGGG 200
BSNT_05787___ 195 CCACGCTCAGGTTGTCCTATACGATCTTCGAGAGGATTCAAAGACAAAAG 244
||||||.|||||.||.||..|.||.|||||.||.||.||....||.||.|
RBAM_035060__ 201 CCACGCCCAGGTCGTGCTGCATGACCTTCGCGAAGAGTCTGCAACCAAGG 250
BSNT_05787___ 245 GAGAAACGGACGTCTATTATATGGGCGAAGACAATCCGATGCTGTTATTA 294
||||||||||.|||||.||.|||||.|||||||||||||||||..|..|.
RBAM_035060__ 251 GAGAAACGGATGTCTACTACATGGGAGAAGACAATCCGATGCTCCTTCTC 300
BSNT_05787___ 295 ATCCCCAAAGGGGTGGCTCACGGATATAGAGTGCTGGGAGAGACGCCGCT 344
||.||||||||.||.||.|||||.||.|||||||||||.||.||.|||||
RBAM_035060__ 301 ATTCCCAAAGGCGTCGCACACGGGTACAGAGTGCTGGGCGAAACCCCGCT 350
BSNT_05787___ 345 GACAATTATCTATTTTACCACCATGTCGTATAACCCGGATCAGCCTGATG 394
|||.|||||.|||||.||.||.|||||.||.||.||||||||||||||.|
RBAM_035060__ 351 GACCATTATTTATTTCACGACAATGTCCTACAATCCGGATCAGCCTGACG 400
BSNT_05787___ 395 AAAAAAGAATTCCGTGGAATGATGAGACGATCGGTTTTAACTGGAACACT 444
||||||||||.||||||||||||||.||.|||||.|||.|||||.|.||.
RBAM_035060__ 401 AAAAAAGAATCCCGTGGAATGATGACACCATCGGATTTGACTGGCAGACG 450
BSNT_05787___ 445 GAATTCA--GATAA 456
| .||| ||||.
RBAM_035060__ 451 G--CTCACCGATAG 462
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