Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05598 and RBAM_033840
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:05
# Commandline: needle
# -asequence dna-align/BSNT_05598___csbD.1.9828.seq
# -bsequence dna-align/RBAM_033840___csbD.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05598___csbD-RBAM_033840___csbD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05598___csbD-RBAM_033840___csbD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05598___csbD
# 2: RBAM_033840___csbD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 192
# Identity: 137/192 (71.4%)
# Similarity: 137/192 (71.4%)
# Gaps: 6/192 ( 3.1%)
# Score: 457.5
#
#
#=======================================
BSNT_05598___ 1 ATGGGTAACGATA---GTGTAAAAGACAAAATGAAGGGCGGCTTCAATAA 47
|||.||.|.|||| ||.|||||||||||.|.||.||||||.|.||.||
RBAM_033840__ 1 ATGAGTCAAGATAACGGTTTAAAAGACAAAGTAAAAGGCGGCATGAACAA 50
BSNT_05598___ 48 AGCCAAAGGAGAAGTGAAGGATAAAGCCGGAGATATGGCTGACAGAACGG 97
|...|||||.||||..|||||.|||||.||.||.|||||..|||...|.|
RBAM_033840__ 51 AATGAAAGGGGAAGCAAAGGACAAAGCAGGCGACATGGCAAACAAGTCCG 100
BSNT_05598___ 98 ACATGCAGGCTGAAGGCAAAAAAGATAAGGCAAAAGGCGAAATCCAAAAG 147
||.|..|.||.|||||.||||||||.||.||.||||||....|.||||||
RBAM_033840__ 101 ACTTAAAAGCGGAAGGTAAAAAAGACAAAGCGAAAGGCAGCCTGCAAAAG 150
BSNT_05598___ 148 GATATCGGGAAAGCCAAGGATAAATTTTCAGATAAAGATTAA 189
|.|.||||.|||.|.||.|||||| .|||| |.|.||||||
RBAM_033840__ 151 GGTGTCGGCAAAACGAAAGATAAA--CTCAG-TGATGATTAA 189
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