Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04824 and RBAM_029620
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:21
# Commandline: needle
# -asequence dna-align/BSNT_04824___frlR.1.9828.seq
# -bsequence dna-align/RBAM_029620___yurK.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04824___frlR-RBAM_029620___yurK.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04824___frlR-RBAM_029620___yurK.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04824___frlR
# 2: RBAM_029620___yurK
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 729
# Identity: 574/729 (78.7%)
# Similarity: 574/729 (78.7%)
# Gaps: 0/729 ( 0.0%)
# Score: 2250.0
#
#
#=======================================
BSNT_04824___ 1 TTGTTAAACAACGGAAGTTCTACACCTTTATACATTCAGCTAAAACAAAT 50
||||||||.|||||.||.||.|.|||||||||.||||||||.||||||||
RBAM_029620__ 1 TTGTTAAATAACGGGAGCTCGAAACCTTTATATATTCAGCTGAAACAAAT 50
BSNT_04824___ 51 CATCACTGATGACATCAAAAAGGGCGTGTATTCCCCAACCGCCAAGCTGC 100
.|||.|.||.||.|||||.||||||||.|||||.||..|||..||.||||
RBAM_029620__ 51 TATCGCGGACGATATCAAGAAGGGCGTTTATTCGCCGTCCGTAAAACTGC 100
BSNT_04824___ 101 CTACCGAAAACGAGCTTTGCACCAAGTATAACGTCAGCCGCATCACCGTC 150
|.||||||||.|||||.|||...|.|||.||||||||||||||.||.|||
RBAM_029620__ 101 CGACCGAAAATGAGCTGTGCGAAACGTACAACGTCAGCCGCATAACGGTC 150
BSNT_04824___ 151 AGGAAAGCCATTCTCGATTTAGTCGAAGAAGGCTATCTGATCAGGCAGCA 200
|||||.|||||.||.|||.|.||.||||||||||..||..||.|||||||
RBAM_029620__ 151 AGGAAGGCCATCCTTGATCTTGTGGAAGAAGGCTGGCTCGTCCGGCAGCA 200
BSNT_04824___ 201 GGGAAAGGGAACGTTCGTTAAAAGCCCTAAATTAAAACGAGAGCTGATCG 250
|||||||||||||||||||||||||||||||.|.||.||.|||||.||||
RBAM_029620__ 201 GGGAAAGGGAACGTTCGTTAAAAGCCCTAAACTGAAGCGGGAGCTCATCG 250
BSNT_04824___ 251 CTGTAAACGGCTACTCGGAATTTATGGAATCAACCGGCAAAAAACCGAAG 300
|.||.|||||||||||.|||||||||||||||||.||.|||||||||||.
RBAM_029620__ 251 CGGTCAACGGCTACTCTGAATTTATGGAATCAACGGGGAAAAAACCGAAA 300
BSNT_04824___ 301 CATCATGTGCTGTCCCATGACATCATTCCAGCGTCAAAACCCATCGCAGA 350
||.||..|.||.||||||||.||||||..||||.|.|||.|||||||..|
RBAM_029620__ 301 CACCAGATTCTTTCCCATGAAATCATTGAAGCGCCTAAATCCATCGCCCA 350
BSNT_04824___ 351 AAAGCTTCAAATCCATCCCGAGAGCCCTGTCGTTGAATTAAAACGGATTT 400
|||.||||...||..|.||||.||.||.||..|||||||||||||.||||
RBAM_029620__ 351 AAAACTTCGCGTCGCTTCCGAAAGTCCCGTTCTTGAATTAAAACGCATTT 400
BSNT_04824___ 401 TATATAATGATGATCAGCCTCTCACCTTTGAAGTGACGCATTATCCGCTT 450
|||.|.|.||.||.|||||.|||.|.||.|||.|..|.||.||||||||.
RBAM_029620__ 401 TATTTCACGACGACCAGCCGCTCTCATTCGAAATCGCCCACTATCCGCTC 450
BSNT_04824___ 451 GATTTGTTTCCCGGCATTGATACCTTTATTGCTGACGGCGTCTCCATGCA 500
..|||.|||||||.|||.|..|....||||...|.||||||.||.|||||
RBAM_029620__ 451 AGTTTATTTCCCGACATCGGCAAGCATATTAAAGGCGGCGTGTCGATGCA 500
BSNT_04824___ 501 TGATATTTTGAAACAGCAATACAAAGTTGTACCCACGCACAATACTAAGC 550
|||.||||||||||||||.||..|.||.||.|||||.||.|||||.||||
RBAM_029620__ 501 TGACATTTTGAAACAGCACTATCAGGTGGTGCCCACCCATAATACGAAGC 550
BSNT_04824___ 551 TATTAAACGTTGTATATGCCCAACAGGAGGAAAGCAAATACCTGGATTGT 600
|.|||||.||.|||||.|||.|.|||||.||||||...||.||||.||||
RBAM_029620__ 551 TGTTAAATGTCGTATACGCCAAGCAGGAAGAAAGCCGCTATCTGGCTTGT 600
BSNT_04824___ 601 GATATCGGGGATGCGCTGTTTGAAATTGATAAAACGGCTTTTACATCAAA 650
|||||||||||||||||.|||||||||||.|||||.|||||||..|||||
RBAM_029620__ 601 GATATCGGGGATGCGCTTTTTGAAATTGACAAAACTGCTTTTATGTCAAA 650
BSNT_04824___ 651 CGACCAGCCAATCTATTGCTCATTGTTTTTGATGCACACAAACCGTGTCA 700
.||||||||.||.||..||||..|||||||.|||||.||..||||.||||
RBAM_029620__ 651 AGACCAGCCGATATACAGCTCGCTGTTTTTAATGCATACCGACCGCGTCA 700
BSNT_04824___ 701 CTTTTACCATCAACAGCCCCTACACATAA 729
|.||||||||.|||||.|||||..|.|||
RBAM_029620__ 701 CGTTTACCATTAACAGTCCCTATGCGTAA 729
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