Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04783 and RBAM_029430
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:19
# Commandline: needle
# -asequence dna-align/BSNT_04783___lipA.1.9828.seq
# -bsequence dna-align/RBAM_029430___lipA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04783___lipA-RBAM_029430___lipA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04783___lipA-RBAM_029430___lipA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04783___lipA
# 2: RBAM_029430___lipA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 897
# Identity: 765/897 (85.3%)
# Similarity: 765/897 (85.3%)
# Gaps: 0/897 ( 0.0%)
# Score: 3297.0
#
#
#=======================================
BSNT_04783___ 1 TTGGCAAAGAAAGACGAACACCTCAGAAAGCCCGAATGGCTTAAAATTAA 50
.||||||||||||||||.||.||.||||||||.||||||||.|||||.||
RBAM_029430__ 1 ATGGCAAAGAAAGACGAGCATCTGAGAAAGCCGGAATGGCTCAAAATAAA 50
BSNT_04783___ 51 ATTAAATACAAATGAAAACTATACAGGGCTCAAAAAACTCATGCGGGAAA 100
..|.||.||.||||||||||||||.||.||.||||||.|.|||||.||||
RBAM_029430__ 51 GCTGAACACGAATGAAAACTATACGGGTCTGAAAAAATTAATGCGTGAAA 100
BSNT_04783___ 101 ACAACCTGCACACCGTATGCGAAGAAGCAAAGTGCCCGAATATTCATGAA 150
|.||.|||||.||||||||.|||||||||||.||||||||.||.||||||
RBAM_029430__ 101 ATAATCTGCATACCGTATGTGAAGAAGCAAAATGCCCGAACATCCATGAA 150
BSNT_04783___ 151 TGCTGGGCGGTCAGACGTACAGCGACATTTATGATTTTAGGTTCTGTTTG 200
||||||||.|||||||||||.|||||.||.||||||.|.|||||.||.||
RBAM_029430__ 151 TGCTGGGCTGTCAGACGTACGGCGACGTTCATGATTCTCGGTTCCGTCTG 200
BSNT_04783___ 201 TACAAGAGCATGCCGTTTCTGTGCTGTCAAAACAGGCCTTCCAACTGAGC 250
|||.|||||||||||||||||.|||||.|||||.||.||.||.|||||||
RBAM_029430__ 201 TACGAGAGCATGCCGTTTCTGCGCTGTAAAAACGGGACTGCCGACTGAGC 250
BSNT_04783___ 251 TTGACCTGCAAGAGCCGGAACGCGTAGCGGATTCAGTCGCGCTTATGAAT 300
|.||.|||||.||.||||||||||||||.|||||.||||||||.||||||
RBAM_029430__ 251 TGGATCTGCAGGAACCGGAACGCGTAGCTGATTCCGTCGCGCTGATGAAT 300
BSNT_04783___ 301 CTGAAACACGCGGTCATTACGGCTGTTGCGCGTGACGATCAGAAAGATGG 350
.|.||||||||.|||||.|||||.||.||||||||.|||||||||||.||
RBAM_029430__ 301 TTAAAACACGCCGTCATCACGGCCGTAGCGCGTGATGATCAGAAAGACGG 350
BSNT_04783___ 351 AGGGGCAGGCATTTTCGCGGAAACTGTCCGTGCGATCCGCAGAAAAAGCC 400
.||.||||||.|.||.||||||||.|||||.|||||||||||||||||||
RBAM_029430__ 351 CGGAGCAGGCGTCTTTGCGGAAACGGTCCGGGCGATCCGCAGAAAAAGCC 400
BSNT_04783___ 401 CGTTCACAACAATTGAGGTGCTGCCGTCTGATATGGGCGGAAACTACGAT 450
|||||||.||||||||.||||||||.||.||||||||||||||.|||||.
RBAM_029430__ 401 CGTTCACGACAATTGAAGTGCTGCCATCCGATATGGGCGGAAATTACGAC 450
BSNT_04783___ 451 AACCTAAAAACCTTAATGGATACACGCCCAGACATCCTGAATCACAATAT 500
|||||.|||||.|||||||||||.||.||.||.||.|||||.|||||.||
RBAM_029430__ 451 AACCTGAAAACATTAATGGATACCCGTCCTGATATTCTGAACCACAACAT 500
BSNT_04783___ 501 CGAAACGGTTCGCCGCCTGACGCCAAGAGTCCGCGCGCGTGCGACGTACG 550
.|||||.||.|||||||||||.||.||||||||.||.||.||.||.||.|
RBAM_029430__ 501 TGAAACCGTCCGCCGCCTGACACCGAGAGTCCGGGCCCGCGCAACATATG 550
BSNT_04783___ 551 ACCGTTCATTGGAATTTTTGCGCCGTGCGAAGGAAATGCAGCCTGACATT 600
|||||||.||||||||.||||||||||||||.|||||||||||||||||.
RBAM_029430__ 551 ACCGTTCTTTGGAATTCTTGCGCCGTGCGAAAGAAATGCAGCCTGACATC 600
BSNT_04783___ 601 CCTACAAAATCAAGTATCATGATCGGACTCGGCGAAACAAAAGAAGAGAT 650
||.||.||||||||.||.||||||||.|||||||||||.||.|||||.||
RBAM_029430__ 601 CCGACGAAATCAAGCATTATGATCGGTCTCGGCGAAACGAAGGAAGAAAT 650
BSNT_04783___ 651 TATTGAAGTAATGGACGACCTTTTGGCGAACAACGTGGATATTATGGCAA 700
|||||||||.|||||||||||..|.||||||||.||.||.||.|||||.|
RBAM_029430__ 651 TATTGAAGTGATGGACGACCTGCTTGCGAACAATGTCGACATCATGGCGA 700
BSNT_04783___ 701 TCGGCCAATATCTGCAGCCGACGAAGAAACACTTGAAAGTCCAAAAATAC 750
||||||||||.|||||||||.||||.|||||.||.||||||||||||||.
RBAM_029430__ 701 TCGGCCAATACCTGCAGCCGTCGAAAAAACATTTAAAAGTCCAAAAATAT 750
BSNT_04783___ 751 TACCATCCTGATGAATTTGCAGAATTAAAAGAAATCGCGATGCAAAAAGG 800
||.|||||.||.||||||||.|||.|.|||||||||||||||||||||||
RBAM_029430__ 751 TATCATCCGGACGAATTTGCCGAACTGAAAGAAATCGCGATGCAAAAAGG 800
BSNT_04783___ 801 CTTCAGCCATTGTGAAGCCGGTCCGCTTGTCCGTTCCTCTTACCATGCGG 850
|||||||||.||||||||.||.||||||||||||||.||.||||||||||
RBAM_029430__ 801 CTTCAGCCACTGTGAAGCAGGCCCGCTTGTCCGTTCTTCCTACCATGCGG 850
BSNT_04783___ 851 ATGAACAAGTAAACGAAGCATCTAAAAAGCGTCAAGCACAAGCATAA 897
||||||||||.||||||||.||||||||.||.||.||.|||||||||
RBAM_029430__ 851 ATGAACAAGTGAACGAAGCGTCTAAAAAACGCCAGGCCCAAGCATAA 897
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