Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04728 and RBAM_029180
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:17
# Commandline: needle
# -asequence dna-align/BSNT_04728___guaC.1.9828.seq
# -bsequence dna-align/RBAM_029180___guaC.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04728___guaC-RBAM_029180___guaC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04728___guaC-RBAM_029180___guaC.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04728___guaC
# 2: RBAM_029180___guaC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 987
# Identity: 776/987 (78.6%)
# Similarity: 776/987 (78.6%)
# Gaps: 12/987 ( 1.2%)
# Score: 3002.0
#
#
#=======================================
BSNT_04728___ 1 ATGGAAAACGTATTTGATTACGAAGATATTCAGCTAATTCCTGCAAAATG 50
||||||||.||||||||||||||||||||||||||.||||||||||||||
RBAM_029180__ 1 ATGGAAAATGTATTTGATTACGAAGATATTCAGCTGATTCCTGCAAAATG 50
BSNT_04728___ 51 CATTGTAAATAGCCGTTCAGAATGTGATACATCCG-TACGTTTAGGCGGA 99
||||||..|.|||||.||.||||||||||||||.| ||| .||.||||||
RBAM_029180__ 51 CATTGTGGACAGCCGATCTGAATGTGATACATCAGTTAC-ATTGGGCGGA 99
BSNT_04728___ 100 CGTACATTTAAATTGCCCGTCGTCCCTGCCAATATGCAGACGATTATAGA 149
|..||.||||||.|.||.|||||.||.|||||.|||||||||||.|||||
RBAM_029180__ 100 CACACGTTTAAACTTCCGGTCGTGCCGGCCAACATGCAGACGATAATAGA 149
BSNT_04728___ 150 TGAAAAACTAGCGATTTCATTAGCCGAAAATGGCTACTTTTATGTGATGC 199
||||||..|.|||...|...|.||.|||||.||.||.||||||.|.||||
RBAM_029180__ 150 TGAAAACATCGCGGCCTGGCTCGCGGAAAACGGGTATTTTTATATCATGC 199
BSNT_04728___ 200 ACCGATTTGAACCTGAAAAACGGATTGATTTTATTAAAGATATGAACGCA 249
||||.||.|||||.||||||||..|.|.||||.|..|.||||||||.||.
RBAM_029180__ 200 ACCGCTTCGAACCGGAAAAACGCCTGGCTTTTGTCCAGGATATGAAAGCG 249
BSNT_04728___ 250 CGCGG-GTTATTCTCTTCTATCAGCGTGGGCGTCAAAGATGAGGAGTATG 298
||||| .|.||| |||||.|||||.||.|||||.||.||..|.||.||||
RBAM_029180__ 250 CGCGGACTGATT-TCTTCCATCAGTGTCGGCGTGAAGGAAAATGATTATG 298
BSNT_04728___ 299 AATTTGTCCGCCAGCTG---GCAGAAGAAAATCTGACTCCTGAATACGTG 345
||||..||||..||||| |||.|.||...|.|| ||.||.||..|.
RBAM_029180__ 299 AATTCATCCGGGAGCTGAAAGCACAGGAGCTTGTG---CCGGATTATATT 345
BSNT_04728___ 346 ACAATTGACATTGCTCACGGGCACTCAAATGCTGTCATTGAAATGATCCA 395
||.|||||.||.||.|||||.||.||.|||||.||.||....||||||||
RBAM_029180__ 346 ACCATTGATATCGCGCACGGCCATTCCAATGCCGTGATCAGCATGATCCA 395
BSNT_04728___ 396 GCACCTTAAAAAACATTTGCCGGACAGCTTTGTTATTGCTGGCAACGTCG 445
.....|||||.|||||.|.|||||.||||||||.||.||.||.||.||||
RBAM_029180__ 396 ATTTATTAAAGAACATGTCCCGGAAAGCTTTGTCATCGCAGGGAATGTCG 445
BSNT_04728___ 446 GAACGCCGGAAGCGGTCAGAGAGCTTGAAAATGCGGGAGCGGATGCCACT 495
|.|||||.|||||.||.||.|||||.|||...|||||.||.||.||.||.
RBAM_029180__ 446 GGACGCCTGAAGCCGTAAGGGAGCTGGAACGCGCGGGCGCTGACGCGACA 495
BSNT_04728___ 496 AAAGTCGGCATCGGACCGGGAAAAGTATGTATTACGAAAATCAAAACCGG 545
|||||.||.|||||.||.||.|||||.||.||.||.|||||.||||||||
RBAM_029180__ 496 AAAGTGGGAATCGGCCCCGGGAAAGTCTGCATCACCAAAATTAAAACCGG 545
BSNT_04728___ 546 CTTCGGCACAGGCGGCTGGCAATTAGCGGCGCTGCGCTGGTGTGCCAAGG 595
||||||.||.|||||.|||||||||||.|||||.||||||||.||.||.|
RBAM_029180__ 546 CTTCGGAACCGGCGGATGGCAATTAGCCGCGCTTCGCTGGTGCGCAAAAG 595
BSNT_04728___ 596 CTGCCAGCAAACCGATTATCGCGGATGGCGGCATCCGCACCCATGGCGAC 645
|.||.|||||||||||.||.||.||.||||||||||||||.||.|||||.
RBAM_029180__ 596 CGGCGAGCAAACCGATCATTGCTGACGGCGGCATCCGCACACACGGCGAT 645
BSNT_04728___ 646 ATCGCAAAATCAATCCGATTCGGCGCAACGATGGTCATGATCGGTTCACT 695
||.||.|||||.|||||||||||||||.|.||||||||||||||.|||.|
RBAM_029180__ 646 ATTGCGAAATCCATCCGATTCGGCGCATCCATGGTCATGATCGGATCATT 695
BSNT_04728___ 696 ATTTGCCGGACACGAAGAATCGCCAGGCCAAACGATCGAAAAAGACGGAA 745
|||.|||||.|||||||||||.||.||.|||||||||||||..||.||||
RBAM_029180__ 696 ATTCGCCGGCCACGAAGAATCACCGGGACAAACGATCGAAATCGATGGAA 745
BSNT_04728___ 746 AGCTTTACAAGGAGTACTTCGGCTCAGCCTCTGAATTCCAAAAAGGCGAA 795
||||.|||||.||.||.||||||||.||.||||||||.||||||||||||
RBAM_029180__ 746 AGCTGTACAAAGAATATTTCGGCTCCGCTTCTGAATTTCAAAAAGGCGAA 795
BSNT_04728___ 796 AAGAAAAATGTCGAAGGCAAAAAAATGCATGTGGCGCATAAAGGCTCAAT 845
||||||||.|||||||||||||||||||||||.|.|||||||||.||..|
RBAM_029180__ 796 AAGAAAAACGTCGAAGGCAAAAAAATGCATGTCGAGCATAAAGGGTCTTT 845
BSNT_04728___ 846 CAAGGATACACTGATTGAAATGGAGCAGGATCTTCAATCTTCTATTTCTT 895
..||||.||.|||.|||||||||||||||||||.||||||||.||.||||
RBAM_029180__ 846 ACAGGACACGCTGGTTGAAATGGAGCAGGATCTGCAATCTTCCATCTCTT 895
BSNT_04728___ 896 ATGCAGGCGG-AACAAAGCTTGACGCCATCCGCAATGTGGATTATGTGAT 944
|.||.||||| ||.|.| ||.||.||||||||||||||.||.||.|||||
RBAM_029180__ 896 ACGCCGGCGGCAATACA-CTCGAAGCCATCCGCAATGTCGACTACGTGAT 944
BSNT_04728___ 945 TGTGAAGAATTCCATTTTTAATGGGGATAAATATTAA 981
.||.||.||.||.|||||.||.||.||.|.||.||||
RBAM_029180__ 945 CGTAAAAAACTCTATTTTCAACGGCGACAGATTTTAA 981
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