Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04717 and RBAM_029110

See Amino acid alignment / Visit BSNT_04717 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:16
# Commandline: needle
#    -asequence dna-align/BSNT_04717___yuiD.1.9828.seq
#    -bsequence dna-align/RBAM_029110___yuiD.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04717___yuiD-RBAM_029110___yuiD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04717___yuiD-RBAM_029110___yuiD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04717___yuiD
# 2: RBAM_029110___yuiD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 480
# Identity:     371/480 (77.3%)
# Similarity:   371/480 (77.3%)
# Gaps:           6/480 ( 1.2%)
# Score: 1421.0
# 
#
#=======================================

BSNT_04717___      1 ATGGA---ACTTTTAACGAATTTTCCTTTATTATCAAGCCTGGCCGCAAT     47
                     |||||   ||||   |.|||||||||||||.|..|.||..|.|||||.||
RBAM_029110__      1 ATGGATGTACTT---ATGAATTTTCCTTTACTGGCGAGTTTTGCCGCCAT     47

BSNT_04717___     48 TATTTTTGCTCAGGTCATCAAAGTGCCCATACAGTTTATCGTGTCCAGAA     97
                     |||||||||.||.||..|.||||||||.||.||.||||||||.||||.||
RBAM_029110__     48 TATTTTTGCCCAAGTTGTAAAAGTGCCTATTCAATTTATCGTATCCAAAA     97

BSNT_04717___     98 AACTGGACTGGTCGCTGGTCACAAGCACAGGCGGCATGCCGAGCTCTCAC    147
                     ||||.||||||||.||.||.||.|||||.|||||||||||||||||.||.
RBAM_029110__     98 AACTTGACTGGTCTCTTGTGACGAGCACCGGCGGCATGCCGAGCTCCCAT    147

BSNT_04717___    148 TCCGCAGCGGTCACTGCGCTTTCTACAGGAGTAGCCTTGGAGCATGGATT    197
                     |||||.||.|||||.|||||.||.||.|||||.||.|||||.||.|||.|
RBAM_029110__    148 TCCGCCGCCGTCACCGCGCTGTCAACCGGAGTCGCTTTGGAACAGGGACT    197

BSNT_04717___    198 AGACTCCTCACTCTTTGCGGTTTCCGCCATTTTCGCCGTCATAACCATGT    247
                     .|||||..|.||.|||||..|..||||.||||||||||||||.||.||||
RBAM_029110__    198 GGACTCGCCCCTGTTTGCAATCGCCGCGATTTTCGCCGTCATTACGATGT    247

BSNT_04717___    248 TTGACGCAACTGGCGTCAGACGTCACGCCGGTGAGCAGGCAACAGTCATT    297
                     |.|||||.||.||.|||||.||.||.||.|||||.|||||.||.||||||
RBAM_029110__    248 TCGACGCTACAGGTGTCAGGCGGCATGCGGGTGAACAGGCGACGGTCATT    297

BSNT_04717___    298 AATAAGCTTGTTATTGATTTTAACCGTTTCGTAAATGAAGCGAAGGACTT    347
                     |||||.||.||.||.||.|||||.||.||.||.|..||||||||||||||
RBAM_029110__    298 AATAAACTGGTCATCGACTTTAATCGGTTTGTCAGCGAAGCGAAGGACTT    347

BSNT_04717___    348 CCCTAAGGCTGCAGAGAAAGAAAAGCAAAAAAAGCTGAAAGAGCTTCTCG    397
                     .|..||.||.|.||||||||||||.||.||.||.||||||||.||.||||
RBAM_029110__    348 TCAGAAAGCGGAAGAGAAAGAAAAACAGAAGAAACTGAAAGAACTGCTCG    397

BSNT_04717___    398 GACATCAGCCGATCGAAGTCTTTTTCGGAGGATTAACAGGTATTTTACTG    447
                     |.|||||||||||.|||||.||.|||||.||..|.||.||||||.|.|||
RBAM_029110__    398 GCCATCAGCCGATTGAAGTGTTCTTCGGCGGCGTCACCGGTATTGTGCTG    447

BSNT_04717___    448 ACATTGGTACTCGCTTACTTTTTCATGTAA    477
                     ||||||.|..|.|.|||.||.||.||||||
RBAM_029110__    448 ACATTGATTTTAGATTATTTCTTTATGTAA    477


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