Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04239 and RBAM_026070
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:39
# Commandline: needle
# -asequence dna-align/BSNT_04239___ytcD.1.9828.seq
# -bsequence dna-align/RBAM_026070___ytcD.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04239___ytcD-RBAM_026070___ytcD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04239___ytcD-RBAM_026070___ytcD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04239___ytcD
# 2: RBAM_026070___ytcD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 392
# Identity: 286/392 (73.0%)
# Similarity: 286/392 (73.0%)
# Gaps: 16/392 ( 4.1%)
# Score: 1014.5
#
#
#=======================================
BSNT_04239___ 1 ATGGAGAAGAAAAAATATAACATTTCTGTTGAAGCGACTCTTGAAGTGAT 50
.||..||||||||||||.||.||.||.||.||||||.|.|||||||||||
RBAM_026070__ 1 TTGCTGAAGAAAAAATACAATATATCCGTAGAAGCGGCGCTTGAAGTGAT 50
BSNT_04239___ 51 CGGTGGGAAATGGAAATGCGTCATTTTATGCCATCTGACGCACGGAAAAA 100
|||.||.||||||||.||.||.||..|.|||||.||.|.||.|||.||||
RBAM_026070__ 51 CGGCGGAAAATGGAAGTGTGTGATCCTCTGCCACCTCATGCGCGGGAAAA 100
BSNT_04239___ 101 AACGCACAAGTGAATTAAAACGCCTAATGCCCAATATCACGCAAAAAATG 150
||||.|||||.|||||.||.||.||.|||||..|.|||||.||.||.|||
RBAM_026070__ 101 AACGGACAAGCGAATTGAAGCGGCTTATGCCGGACATCACCCAGAAGATG 150
BSNT_04239___ 151 CTGACTCAGCAGCTGCGCGAGCTGGAAGCGGACAGTGTCATTAACCGAAT 200
|||||.|||||..||||.|||||||||||.|||.|.|||||.|||||.||
RBAM_026070__ 151 CTGACACAGCAATTGCGGGAGCTGGAAGCTGACGGCGTCATCAACCGGAT 200
BSNT_04239___ 201 CGTATATAATCAAGTTCCTCCCAAAGTGGAATACGAGCTCAGCGAATACG 250
|||.||.|||||.||.||.||.|||||||||||||||||.||.|||||||
RBAM_026070__ 201 CGTGTACAATCAGGTGCCGCCGAAAGTGGAATACGAGCTGAGTGAATACG 250
BSNT_04239___ 251 GCCGCAGCTTAGAAGGGATTTTAGATATGCTGTGTGCTTGGGGAGCGAAT 300
|.|.|||..|.|||.|.||||||.|...||||||.|..|||||.||||..
RBAM_026070__ 251 GGCACAGTCTGGAAAGAATTTTAAACGCGCTGTGCGACTGGGGCGCGATG 300
BSNT_04239___ 301 CATATT----AACAGAGTGTACGGGGATACATTTTCTGTGCTAGAAGAAA 346
|||||| ||| .||||||.||....|.|||.||..||||.||.|
RBAM_026070__ 301 CATATTGCTAAAC----GGTACGGCGAGGTGTCTTCCGTTTTAGAGGACA 346
BSNT_04239___ 347 GTGTGCTCAATGATAAGTTAAAA----CAGG---AATCATAA 381
|..|..|.|||||.||.||.||| |.|| ||| ||||
RBAM_026070__ 347 GCATTTTAAATGACAAATTTAAAGAACCGGGACAAAT-ATAA 387
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