Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04204 and RBAM_025870
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:37
# Commandline: needle
# -asequence dna-align/BSNT_04204.1.9828.seq
# -bsequence dna-align/RBAM_025870___abnA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04204-RBAM_025870___abnA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04204-RBAM_025870___abnA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04204
# 2: RBAM_025870___abnA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 966
# Identity: 417/966 (43.2%)
# Similarity: 417/966 (43.2%)
# Gaps: 441/966 (45.7%)
# Score: 1653.0
#
#
#=======================================
BSNT_04204 0 -------------------------------------------------- 0
RBAM_025870__ 1 ATGAAAAACAGATTCAGACGCATGATCCGCTTTTCGTGCGCAGCCGTTAC 50
BSNT_04204 0 -------------------------------------------------- 0
RBAM_025870__ 51 AGCCGGGCTGCTGCTGATGTCTTCATCTCCGGCATCTGCCGCGTTTTGGG 100
BSNT_04204 0 -------------------------------------------------- 0
RBAM_025870__ 101 GGGCATCAAATGAATTGCTGCACGATCCGACAATGGCGAAGGAAGGAAAC 150
BSNT_04204 0 -------------------------------------------------- 0
RBAM_025870__ 151 ACGTGGTACGCTTTCGGAACCGGTTTGGAAGGGGAGAGGGGGCTTCGCGT 200
BSNT_04204 0 -------------------------------------------------- 0
RBAM_025870__ 201 CTTAAAGGCGGGCAGCGGCGGCGTATGGACCGTTCAGAAATCAATCTTTA 250
BSNT_04204 0 -------------------------------------------------- 0
RBAM_025870__ 251 CTTCTCCGCTGTCATGGTGGGGCAATTATGTGCCGAATTACGGGCTGAAT 300
BSNT_04204 0 -------------------------------------------------- 0
RBAM_025870__ 301 CAATGGGCCCCCGATGTTCAATATTTTAACGGAAAGTATTGGCTGTATTA 350
BSNT_04204 0 -------------------------------------------------- 0
RBAM_025870__ 351 TGCCGTTTCTTCATTCGGCAAAAATACCTCCGCGATCGGTCTTGCATCAT 400
BSNT_04204 1 -----------------------------------------GTGATTCGT 9
||.||.|||
RBAM_025870__ 401 CTACAAGTCTCAGTTCGGGAAACTGGAAGGACGAAGGGCTCGTCATCCGT 450
BSNT_04204 10 TCGACAAGCTCAAATAATTATAACGCCATTGATCCGGAGCTGACATTCGA 59
||.||||||.|..||||.||.||.||.||||||||||||||||||.|.||
RBAM_025870__ 451 TCAACAAGCGCCGATAACTACAATGCAATTGATCCGGAGCTGACAATTGA 500
BSNT_04204 60 CAAGGATGGCAACCCGTGGCTCGCGTTCGGCTCGTTTTGGAGCGGCATTA 109
.||.||.||.|||||.|||||.||.|||||.||.||||||||||||||||
RBAM_025870__ 501 TAAAGACGGAAACCCTTGGCTTGCCTTCGGTTCTTTTTGGAGCGGCATTA 550
BSNT_04204 110 AGCTGACCAAGCTTGATAAGAATACGATGAAGCCTACAGGCTCGCTCTAT 159
|||||||.|||||||||||.|||||.|||||.||.||.||.||.||.|||
RBAM_025870__ 551 AGCTGACAAAGCTTGATAAAAATACAATGAAACCGACGGGATCACTTTAT 600
BSNT_04204 160 TCGATTGCAGCTAGACCGAATAATGGAGGTGCCTTAGAAGCTCCTACTCT 209
||.||.||.||.|||||||||||.||.||.||.||.|||||.||..|..|
RBAM_025870__ 601 TCCATCGCTGCCAGACCGAATAACGGCGGAGCTTTGGAAGCGCCGGCCAT 650
BSNT_04204 210 TACGTATCAAAATGGATATTACTATTTAATGGTTTCATTTGATAAATGCT 259
.||.||.||.||.||.||.||.||.||||||||.||.|||||||||||||
RBAM_025870__ 651 CACCTACCAGAACGGCTACTATTACTTAATGGTGTCGTTTGATAAATGCT 700
BSNT_04204 260 GTGACGGAGTAAACAGTACGTACAAAATTGCTTACGGAAGATCCAAAAAC 309
||...||.||.||.||||||||||||||.|||||.|||||||||||||.|
RBAM_025870__ 701 GTTCAGGCGTGAATAGTACGTACAAAATCGCTTATGGAAGATCCAAAAGC 750
BSNT_04204 310 ATTACAGGCCCTTATCTTGATAAAAGCGGAAAAAGCATGCTTGAAGGCGG 359
||.||.|||||.|||||.|||||||||||.|||||||||...||||||||
RBAM_025870__ 751 ATCACCGGCCCATATCTCGATAAAAGCGGGAAAAGCATGTCAGAAGGCGG 800
BSNT_04204 360 AGGCACCATTTTGGATTCGGGCAATGACCAATGGAAAGGACCTGGAGGCC 409
|||.||.|||.|.||.||.||||||||||..||||||||.||.||.||.|
RBAM_025870__ 801 AGGAACGATTCTTGACTCCGGCAATGACCGCTGGAAAGGCCCGGGCGGTC 850
BSNT_04204 410 AGGATATTGTGAACGGAAACATTCTTGTTCGCCATGCCTATGATGCAAAT 459
|.||.|||||||||||.||.|||.|.||.||.|||||.||||||||..|.
RBAM_025870__ 851 AAGACATTGTGAACGGGAATATTTTAGTGCGTCATGCGTATGATGCCGAA 900
BSNT_04204 460 AACAATGGCATTCCGAAGCTTCTCATCAATGATTTGAATTGGAGCTCGGG 509
||||..||.|||||||||.|.||||||||||||.|..|||||||.||.||
RBAM_025870__ 901 AACAGCGGAATTCCGAAGATGCTCATCAATGATATCGATTGGAGTTCAGG 950
BSNT_04204 510 CTGGCCGTCCTATTGA 525
||||||.|||||||.|
RBAM_025870__ 951 CTGGCCTTCCTATTAA 966
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