Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03477 and RBAM_021470
See
Amino acid alignment /
Visit
BSNT_03477 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:42
# Commandline: needle
# -asequence dna-align/BSNT_03477___ypuA.1.9828.seq
# -bsequence dna-align/RBAM_021470___ypuA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03477___ypuA-RBAM_021470___ypuA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03477___ypuA-RBAM_021470___ypuA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03477___ypuA
# 2: RBAM_021470___ypuA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 910
# Identity: 676/910 (74.3%)
# Similarity: 676/910 (74.3%)
# Gaps: 44/910 ( 4.8%)
# Score: 2527.5
#
#
#=======================================
BSNT_03477___ 1 TTGAAGAAAATTTGGATTGGAATGCTGGCAGCGGCCGTTTTGCTGCTG-A 49
|||||.|||||.|||||||||.|||||||.|||||||||.|..|| || |
RBAM_021470__ 1 TTGAAAAAAATGTGGATTGGATTGCTGGCGGCGGCCGTTGTATTG-TGTA 49
BSNT_03477___ 50 CGGTTCCGAAGGTCAGTCTCGCGGATGCCGCAGTTGGAGATGTCATTGTA 99
|..|.|||||..||||.||.||.|||||||||||.|||||||||||.||.
RBAM_021470__ 50 CAATACCGAAAATCAGCCTGGCCGATGCCGCAGTCGGAGATGTCATCGTC 99
BSNT_03477___ 100 ACACTAGGTGCTGATTTGTCAGAATCCGACAAA----CAAAAAGTGCTTG 145
|||||.||.||.|||.|||||.| ||| ||| ||.||||||||||
RBAM_021470__ 100 ACACTGGGGGCGGATCTGTCAAA---CGA-AAACCGTCAGAAAGTGCTTG 145
BSNT_03477___ 146 ATGAAATGAATGTCCCTGATAATGCCACAACGGTAACCGTGACCAATAAG 195
|.|||.|.||||||||||||||.||.|.||..||.||.||.||.|||||.
RBAM_021470__ 146 ACGAATTAAATGTCCCTGATAACGCGATAAAAGTGACGGTCACGAATAAA 195
BSNT_03477___ 196 GAAGAACATGAATATTTAGGAAAATATATATCAAACGCGCAAATCGGATC 245
|||||||||||||||.|.||||||||||||||.||.||.||||||||..|
RBAM_021470__ 196 GAAGAACATGAATATCTGGGAAAATATATATCGAATGCCCAAATCGGCAC 245
BSNT_03477___ 246 GAGAGCGATTTCTTCATCGTCAATCACCATTGCCAAAAAAGGCTCC-GGA 294
.|||||.||.||||||||.||.|||||..|.||.||.|||||.||| ||.
RBAM_021470__ 246 AAGAGCCATCTCTTCATCATCCATCACGGTGGCAAAGAAAGGATCCGGGC 295
BSNT_03477___ 295 TTGAATGTTGAGACCCATAATATCAGCGGCATCACGGATGAAATGTACCT 344
||| |.|||.|||||||||||||||....|||||||||||||||||||.|
RBAM_021470__ 296 TTG-ACGTTAAGACCCATAATATCAATTCCATCACGGATGAAATGTACTT 344
BSNT_03477___ 345 GAATGCACTGATGACAGCCGGTGTGAAAGATGCGAAGGTGTATGTTACAG 394
.||.||.|||||||||||.||.||||||||||||||.||.||.||.||.|
RBAM_021470__ 345 AAACGCCCTGATGACAGCAGGAGTGAAAGATGCGAAAGTATACGTGACGG 394
BSNT_03477___ 395 CACCGTTTGAAGTATCCGGGACTGCGGCTTTAACTGGATTGATTAAGGCG 444
|.||||||||.|||||.||.||.||.||.|||||.|||.|.||.|||||.
RBAM_021470__ 395 CGCCGTTTGAGGTATCAGGCACCGCAGCATTAACGGGAATCATCAAGGCA 444
BSNT_03477___ 445 TATGAAGTTTCTTCTGACGAAGCGATCTCGGAGGATGTTAAGCAGGTCGC 494
||||||||.||.||.|||.|||||||.||.||.|||||.||.||||||||
RBAM_021470__ 445 TATGAAGTCTCATCAGACAAAGCGATTTCAGAAGATGTAAAACAGGTCGC 494
BSNT_03477___ 495 CAACCAAGAGCTTGTCACGACATCAGAGCTTGGAGACAAAATCGGTAACG 544
||||||||||||||||||.||.|||.|.||.||.||.||||||||..|..
RBAM_021470__ 495 CAACCAAGAGCTTGTCACCACTTCAAATCTCGGGGATAAAATCGGGGATA 544
BSNT_03477___ 545 AAAATGCGGCAGCCCTGATTGCAAAAATCAAAGAAGAGTTTGCTAAAAAC 594
||||.||..|.||.||.||.|||||.||.|||||.||.||.||.||||||
RBAM_021470__ 545 AAAACGCCTCCGCGCTCATCGCAAACATTAAAGATGATTTCGCGAAAAAC 594
BSNT_03477___ 595 GGGGTGCCTGATAATAAAGCTGACATCGAAAAACAAGTGGACGACGCAGC 644
||.|||||.||||..||||..|..||||..|||.|.||.||.||.||.||
RBAM_021470__ 595 GGTGTGCCCGATACAAAAGAAGGAATCGGGAAAAAGGTCGATGATGCGGC 644
BSNT_03477___ 645 TTCTGATTTAAACGTCACACTTACTGACAGC-CAAAAGAACCAGCTTGTC 693
|||..|..|.|||.|.|||||.|||||| || |||||..|||||||.||.
RBAM_021470__ 645 TTCAAACCTTAACATTACACTGACTGAC-GCTCAAAAAGACCAGCTCGTT 693
BSNT_03477___ 694 TCCCTATTCAATAAGATGAAAAACGCTGACATTGACTGGGGACAGGTCAG 743
||..|.||.|||||.||||||||.||..|.|||||.|||||.||.|||.|
RBAM_021470__ 694 TCATTGTTTAATAAAATGAAAAATGCCAAGATTGATTGGGGCCAAGTCGG 743
BSNT_03477___ 744 TGACCAGCTAGATAAAGCGAAAGATAAGATTACGAAATTCATAGAATCAG 793
...||||||.||.||.||.|||||.||.||.|||||.|||||..||||.|
RBAM_021470__ 744 CAGCCAGCTTGACAAGGCAAAAGACAAAATCACGAAGTTCATTCAATCCG 793
BSNT_03477___ 794 ATGAAGGCAAAAACTTCATCCAGAAAGTCATTGATTTCTTCGTATCTATC 843
||||||||||||.|||..|.||.|||||||||||.|||||||..||.||.
RBAM_021470__ 794 ATGAAGGCAAAAGCTTTGTTCAAAAAGTCATTGACTTCTTCGCTTCGATT 843
BSNT_03477___ 844 TGGAATGCGATTGTATCTATATTCAAATAA-------------------- 873
|||||||||||.||.|||.||||.|.|..|
RBAM_021470__ 844 TGGAATGCGATCGTGTCTGTATTTACAGGAGACAGCGGATCAAGTTCTAA 893
BSNT_03477___ 873 ---------- 873
RBAM_021470__ 894 CAACAGCTGA 903
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.