Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02374 and RBAM_013990

See Amino acid alignment / Visit BSNT_02374 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:05
# Commandline: needle
#    -asequence dna-align/BSNT_02374___ykuV.1.9828.seq
#    -bsequence dna-align/RBAM_013990___ykuV.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02374___ykuV-RBAM_013990___ykuV.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02374___ykuV-RBAM_013990___ykuV.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02374___ykuV
# 2: RBAM_013990___ykuV
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 459
# Identity:     360/459 (78.4%)
# Similarity:   360/459 (78.4%)
# Gaps:          12/459 ( 2.6%)
# Score: 1452.0
# 
#
#=======================================

BSNT_02374___      1 ATGAAATTACGTCAGCCCATGCCGGAATTGACGGGAGAAAAAGCTTGGTT     50
                     ||||||||||||||||..|||||.||||||||.||.|..|||||.|||.|
RBAM_013990__      1 ATGAAATTACGTCAGCAAATGCCTGAATTGACAGGCGCTAAAGCATGGAT     50

BSNT_02374___     51 AAATGGTGAAGTGACGAGAGAGCAATTGATTGGGGAAAAGCCGACGCTTA    100
                     .||..|.|||||.||||..||.||..||.|.||.|.|||||||.|.||.|
RBAM_013990__     51 TAACAGAGAAGTCACGAAGGAACAGCTGGTCGGCGGAAAGCCGGCACTGA    100

BSNT_02374___    101 TTCATTTCTGGTCCATCAGCTGCCACTTGTGCAAAGAAGCGATGCCGCAA    150
                     ||||.|||||||||..||||||||.|.||||.||||||||||||||..|.
RBAM_013990__    101 TTCACTTCTGGTCCGCCAGCTGCCGCATGTGTAAAGAAGCGATGCCTGAG    150

BSNT_02374___    151 GTGAATGAATTTCGTGATAAATATCAAGATCAGCTGAATGTTGTAGCTGT    200
                     .||||.||||||||||||||||||.||||||||||||||||.||.||.||
RBAM_013990__    151 ATGAACGAATTTCGTGATAAATATAAAGATCAGCTGAATGTGGTGGCCGT    200

BSNT_02374___    201 ACACATGCCCCGTTCCGAAGATGATCTTGACCTTGGTAAAATTAAAGAAA    250
                     .||||||||||||||||||||.|||||||||||||..|||||.||.||||
RBAM_013990__    201 TCACATGCCCCGTTCCGAAGACGATCTTGACCTTGAGAAAATCAAGGAAA    250

BSNT_02374___    251 CAGCTGCTGAACACGATATCACTCAGCCGATTTTTGTTGACAGTGACCAT    300
                     ||||.|||||||||||||||.||||||||||||..||.|||||.||.|||
RBAM_013990__    251 CAGCGGCTGAACACGATATCTCTCAGCCGATTTACGTCGACAGCGATCAT    300

BSNT_02374___    301 GCTTTAACCGATTCATTTGAAAATGAATATGTACCTGCATATTATGTGTT    350
                     .|..|.||.||..|||||||||||||||||||.||.||.|||||..|.||
RBAM_013990__    301 ACGCTGACTGAAGCATTTGAAAATGAATATGTGCCGGCTTATTACCTTTT    350

BSNT_02374___    351 TGATAAAACAGGACAGCTCCGTCACTTCCAAGCCGGCGGGAGCGGTATGA    400
                     .||||||||.|||||||||||.||.||.|||||.||.||.|||||.||||
RBAM_013990__    351 CGATAAAACCGGACAGCTCCGCCATTTTCAAGCGGGAGGAAGCGGGATGA    400

BSNT_02374___    401 AAATGCTTGAAAAACGTGTGAACCGCGTTCTGGCTGAAACGGAATAG---    447
                     ||||||||||||||||.||.|.|||.||.||....||||||||..||   
RBAM_013990__    401 AAATGCTTGAAAAACGCGTCAGCCGAGTACTTTTAGAAACGGAGCAGGCT    450

BSNT_02374___    447 ---------    447
                              
RBAM_013990__    451 TCTGAGTAA    459


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