Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02308 and RBAM_013510
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:00
# Commandline: needle
# -asequence dna-align/BSNT_02308___ykvL.1.9828.seq
# -bsequence dna-align/RBAM_013510___ykvL.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02308___ykvL-RBAM_013510___ykvL.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02308___ykvL-RBAM_013510___ykvL.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02308___ykvL
# 2: RBAM_013510___ykvL
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 742
# Identity: 575/742 (77.5%)
# Similarity: 575/742 (77.5%)
# Gaps: 20/742 ( 2.7%)
# Score: 2220.0
#
#
#=======================================
BSNT_02308___ 1 ATGGCTAAAGGAATTCCTGTATTAGAAATTTTCGGCCCGACAATTCAAGG 50
|||||||||||||||||.|||||||||||||||||.|||||.||.|||||
RBAM_013510__ 1 ATGGCTAAAGGAATTCCGGTATTAGAAATTTTCGGACCGACGATACAAGG 50
BSNT_02308___ 51 AGAAGGCATGGTGATCGGACAGAAAACGATGTTCGTCCGGACAGCCGGCT 100
.||.||||||||.|||||.||||||||.|||||||||||.||.||.||||
RBAM_013510__ 51 GGAGGGCATGGTTATCGGCCAGAAAACCATGTTCGTCCGCACGGCGGGCT 100
BSNT_02308___ 101 GTGATTATTCCTGCAGCTGGTGTGACTCCGCCTTCACTTGGGACGGGTCT 150
|.||.||.||||||||||||||.||||||||.||.||.||||||||.||.
RBAM_013510__ 101 GCGACTACTCCTGCAGCTGGTGCGACTCCGCTTTTACATGGGACGGCTCA 150
BSNT_02308___ 151 GCTAAAAAAGATATTCGCTGGATGACGGCGGAGGAGATTTTTGCG-GAGC 199
||.|||||||||||.|||||||||||||||||.||.| |||..|| ||||
RBAM_013510__ 151 GCCAAAAAAGATATCCGCTGGATGACGGCGGAAGACA-TTTACCGCGAGC 199
BSNT_02308___ 200 TTAAGGACATTGGCGGAGACGCGTTTTCTCATGTGACGATCTCAGGCGGC 249
|.|..||.||.|||||||||||.|||||.|||||.||.||||||||.||.
RBAM_013510__ 200 TGAGAGAAATCGGCGGAGACGCTTTTTCCCATGTCACCATCTCAGGAGGA 249
BSNT_02308___ 250 AACCCGGCCCTGTTAAAACAGCTGGATGTTTTTATTGAACTGCTGAAGGA 299
||||||||.||||||||.|||||.||.|...|.|||...||||||
RBAM_013510__ 250 AACCCGGCGCTGTTAAAGCAGCTTGACGCGCTGATTCTGCTGCTG----- 294
BSNT_02308___ 300 AAATAACA-----TCCGTGCAGCGCTTGAAACTCAAGGGACCGTTTATCA 344
|||.|.|| |.||.|||||..|.|||||.||.||.||.||.|||||
RBAM_013510__ 295 AAAGAGCACGGGGTGCGCGCAGCTTTAGAAACGCAGGGAACGGTCTATCA 344
BSNT_02308___ 345 GGATTGGTTTACGCTGATTGATGACCTGACAATTTCTCCAAAACCGCCAA 394
|||||||||.||..|||||.|.||||||||.|||||.||.||.|||||||
RBAM_013510__ 345 GGATTGGTTCACAATGATTAACGACCTGACGATTTCACCGAAGCCGCCAA 394
BSNT_02308___ 395 GCTCAAAAATGGTAACGAACTTTCAAAAGCTTGACCACATTTTAACTTCA 444
|.||....|||..|||..|.|||..||||||.||.||||||.|..||||.
RBAM_013510__ 395 GTTCGGGGATGACAACCGATTTTGCAAAGCTCGATCACATTGTGTCTTCG 444
BSNT_02308___ 445 CTTCAAG----AGAATGATAGACAGCATGCTGTCAGCTTGAAGGTTGTCA 490
|||.|.| |||| ||.|...|.||.||||||||.|||||.||||
RBAM_013510__ 445 CTTGATGCGGCAGAA----AGGCTTAACGCGGTCAGCTTAAAGGTCGTCA 490
BSNT_02308___ 491 TCTTTAATGATGAAGATCTTGAATTTGCCAAAATGGTGCACAAGCGGTAT 540
|.|||||||||||||||||..||||.||.||||..|||||||||||||||
RBAM_013510__ 491 TTTTTAATGATGAAGATCTGCAATTCGCGAAAACCGTGCACAAGCGGTAT 540
BSNT_02308___ 541 CCGGGAATCCCGTTTTATTTACAAGTCGGAAATGATGACGTGCATACGAC 590
|||...||||||||||||.|.||.||||||||.|||.||||.||||||||
RBAM_013510__ 541 CCGAATATCCCGTTTTATCTTCAGGTCGGAAACGATAACGTCCATACGAC 590
BSNT_02308___ 591 AGATGATCAGTCACTGATTACACATTTGCTTGGGAAATATGAAGCGCTTG 640
.||.||.|.|.||.||||..|||||.||||.||.|||||.|||.|.||.|
RBAM_013510__ 591 GGACGACCGGGCATTGATCGCACATCTGCTCGGAAAATACGAAACACTCG 640
BSNT_02308___ 641 TTGATAAGGTAGCTGTCGATGCGGAGCTGAATCTCGTAAGAGTGCTCCCG 690
||||||||||..|.|.||||.||||.|||||||||||.|||||.||.||.
RBAM_013510__ 641 TTGATAAGGTTTCAGCCGATTCGGATCTGAATCTCGTCAGAGTCCTGCCT 690
BSNT_02308___ 691 CAGCTGCACACCCTGTTATGGGGCAACAAACGCGGAGTATAA 732
||||||||.||..||.|.||||||||.|||||.|||||.|||
RBAM_013510__ 691 CAGCTGCATACATTGCTTTGGGGCAATAAACGGGGAGTTTAA 732
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