Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02253 and RBAM_013190

See Amino acid alignment / Visit BSNT_02253 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:56
# Commandline: needle
#    -asequence dna-align/BSNT_02253___ykoV.1.9828.seq
#    -bsequence dna-align/RBAM_013190___ykoV.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02253___ykoV-RBAM_013190___ykoV.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02253___ykoV-RBAM_013190___ykoV.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02253___ykoV
# 2: RBAM_013190___ykoV
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 902
# Identity:     672/902 (74.5%)
# Similarity:   672/902 (74.5%)
# Gaps:          37/902 ( 4.1%)
# Score: 2436.5
# 
#
#=======================================

BSNT_02253___      1 ATGCATACAATGTGGAAGGGATCGATCAGCTTCGGATTAGTAAACATCCC     50
                     |||||.||.|||||||||||.||||||||.|||||..|.||.||.|||||
RBAM_013190__      1 ATGCACACGATGTGGAAGGGTTCGATCAGTTTCGGCCTCGTCAATATCCC     50

BSNT_02253___     51 CATCAAGCTATATGCGGCCACAGAAGATAAAGATATTAAACTGCGCAGCC    100
                     ..|||||||.|.|||||||||.||||||||||||||.|||.|.|||||.|
RBAM_013190__     51 GGTCAAGCTCTTTGCGGCCACTGAAGATAAAGATATAAAATTCCGCAGTC    100

BSNT_02253___    101 TCCATAAAGAGGATCACGCACCAATCAAATACGAGAAAGTTTGTACAAAT    150
                     |.||||||||.||.||.||.||.||.||||||||.|||.|.||.||....
RBAM_013190__    101 TTCATAAAGAAGACCATGCGCCGATTAAATACGAAAAAATCTGCACCGGA    150

BSNT_02253___    151 TGCGAAAAAACTCTTAGTCCTGATGAAATTGTGAAGGGATATGAATATGT    200
                     ||.|||||||.|||....|||||||||||||||||.||.|||||.|||||
RBAM_013190__    151 TGTGAAAAAAGTCTGGAACCTGATGAAATTGTGAAAGGCTATGAGTATGT    200

BSNT_02253___    201 AAAAGGGAAATATGTAGTGCTGACGGACGAAGATTTAAAAAGCTTAAAAC    250
                     ||||||||||||.||..|..||||.||||||||.||.|||..|.||||||
RBAM_013190__    201 AAAAGGGAAATACGTCATTATGACAGACGAAGACTTGAAAGACGTAAAAC    250

BSNT_02253___    251 AGGAGCATGAGGAGAAAGCGGTTGAGATTGTTGACTTTGTTCAGCTTCAG    300
                     ||||.|||||.||.||||||||||||||||||||||||||.|||||.|||
RBAM_013190__    251 AGGAACATGAAGAAAAAGCGGTTGAGATTGTTGACTTTGTCCAGCTGCAG    300

BSNT_02253___    301 GAAATTGATCCGATTTACTTTAACCGCTCCTACTTTGTCGGCCCCGGGGA    350
                     |||||||||||||||||.||||||||.||.||.|.||||||.||.||.||
RBAM_013190__    301 GAAATTGATCCGATTTATTTTAACCGGTCGTATTATGTCGGGCCGGGAGA    350

BSNT_02253___    351 TAATGGGACGAAGGCCTATACCCTGCTTCGTGAGGCGCTGCGCTCAACCG    400
                     |||.||.||.||.||||||||.||.||.||.||.|||||..|..|.||.|
RBAM_013190__    351 TAACGGCACAAAAGCCTATACACTTCTGCGGGAAGCGCTAAGGACGACGG    400

BSNT_02253___    401 GAAAGATCGGTATCGCCAATATGACAATCAGGTCAAAGCAGCAGCTGGCG    450
                     |.||.|||||.||.|||...||.||.|||.|.||.||.||||||||.|||
RBAM_013190__    401 GTAAAATCGGGATTGCCTCCATTACGATCCGCTCTAAACAGCAGCTTGCG    450

BSNT_02253___    451 ATTCTCCGTGTTTATGAAAATTGTATCGTCATGGAGTCTATCCATTATCC    500
                     |||||.||.||.|||||.||.||.|||||.|||||.||.||.||||||||
RBAM_013190__    451 ATTCTTCGCGTGTATGACAACTGCATCGTGATGGAATCCATTCATTATCC    500

BSNT_02253___    501 GGATGAGGTCAGAAGCGCCGCTCATGTCCCAGGTGTACCTGATCAATCGA    550
                     ||||||.|||||||..||||..|||||.|||||.||.||.||.||..|..
RBAM_013190__    501 GGATGAAGTCAGAAATGCCGGACATGTGCCAGGCGTTCCCGAGCAGACAG    550

BSNT_02253___    551 ATGTAAACGATAAGGAACTGCAAACTGCTATTACATTAATAGATGAACTG    600
                     ..||.||.||.||.||.|||||.||.||.|||||.|||||..||||.|||
RBAM_013190__    551 CCGTTAATGAAAAAGAGCTGCAGACGGCGATTACGTTAATTAATGAGCTG    600

BSNT_02253___    601 ACTGCTGAGTTTGAGCCTGAGAAATATGAAGACACGTACCGACAGGCGCT    650
                     ||..|.||||||||.||.||..||||.|||||.||||||||..|.||.||
RBAM_013190__    601 ACAACCGAGTTTGACCCGGAACAATACGAAGATACGTACCGGAAAGCCCT    650

BSNT_02253___    651 GCT-GCAAAGAGTCAACGACAAGCTTGAAAATAAAGAAACAGCCGTCACT    699
                     .|| ||.|| |.|.|||||.|||||.|||.||.|||||.|.|.|||.||.
RBAM_013190__    651 TCTCGCTAA-AATTAACGATAAGCTCGAACATGAAGAAGCGGGCGTGACA    699

BSNT_02253___    700 CCTGATAAAGC-GCC--ACCACGTGAAGATGTCATTGACCTGGTAAGCGC    746
                     ||.|.|   || |||  .||.||.||||||||||||||.||.||.|||||
RBAM_013190__    700 CCGGCT---GCTGCCGGCCCGCGCGAAGATGTCATTGATCTTGTCAGCGC    746

BSNT_02253___    747 TCTGCAAGCCAGCATTGACCGAACCAGAA--GGCCGAACCGGGAGACACC    794
                     .||.||.||.|||||||||||.||  |||  |||||.|.||.||   ||.
RBAM_013190__    747 GCTTCAGGCAAGCATTGACCGGAC--GAAGCGGCCGGATCGCGA---ACA    791

BSNT_02253___    795 GGCTGC-----CGCACCTGCACAA-----GCCGC-TGAACCGAAAGGAGC    833
                     ||||||     |||    |.||||     ||||| |.|.|    |||.|.
RBAM_013190__    792 GGCTGCGCCGGCGC----GGACAAAAGACGCCGCGTCAGC----AGGCGG    833

BSNT_02253___    834 CGGAGATAAAAAACGAAAAACAACTAGAAAAAAAGCCTCCGGCACGTCAT    883
                     |||||..|||||.|..||.||.||.|||.||||||   ||||.|||||.|
RBAM_013190__    834 CGGAGGCAAAAAGCAGAAGACGACCAGACAAAAAG---CCGGAACGTCTT    880

BSNT_02253___    884 AG    885
                     |.
RBAM_013190__    881 AA    882


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_02253 and RBAM_013190

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
