Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02183 and RBAM_012790
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:52
# Commandline: needle
# -asequence dna-align/BSNT_02183___dppC.1.9828.seq
# -bsequence dna-align/RBAM_012790___dppC.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02183___dppC-RBAM_012790___dppC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02183___dppC-RBAM_012790___dppC.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02183___dppC
# 2: RBAM_012790___dppC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 980
# Identity: 739/980 (75.4%)
# Similarity: 739/980 (75.4%)
# Gaps: 49/980 ( 5.0%)
# Score: 2826.5
#
#
#=======================================
BSNT_02183___ 1 GTGAATCTCCCTGTACAAACGGATGAACGCCAGCCAGAACAGCACAATCA 50
.||||||||||...|.||||||...|||.| |||| |
RBAM_012790__ 1 ATGAATCTCCCGCAAGAAACGGTAAAACAC--------ACAG-------A 35
BSNT_02183___ 51 GGTGCCTGATGAGTGGTTTGTCTCGAATCA---------GGAAAAAAATC 91
.|||||||||||.||||| ||| |||||.|||..
RBAM_012790__ 36 AGTGCCTGATGACTGGTT---------TCAGCCGGGCGCGGAAAGAAAGG 76
BSNT_02183___ 92 GGGAAGCCGATTCGGTCAAGCGGCCGAGTTTGTCATACACGCAGGATGCC 141
|.|||.||||.|||||||||||.|||||..||||.||||..||||||||.
RBAM_012790__ 77 GTGAAACCGAGTCGGTCAAGCGTCCGAGCCTGTCTTACAGTCAGGATGCG 126
BSNT_02183___ 142 TGGAGGAGGCTGAAAAAAAATAAATTAGCGATGGCCGGACTCTT--TATT 189
|||.||.||||.|||||.||.|||||.|||||||||||.||..| ||||
RBAM_012790__ 127 TGGCGGCGGCTTAAAAAGAACAAATTGGCGATGGCCGGCCTTGTGATATT 176
BSNT_02183___ 190 CTTTTATTTCTTTTTGTCATGACAGTTATCGGGCCCTTTTTATCGCCCCA 239
.|..|...|.|||.|.|| |.|.||..||||.||..|..||||.||.||
RBAM_012790__ 177 ATGCTGCCTGTTTCTATC--GGCTGTGTTCGGTCCGCTGATATCACCGCA 224
BSNT_02183___ 240 TAGTGTCGTACGCCAATCGCTGACAGAACAAAATCTTCCGCCCTCAGCCG 289
.||.||...|.|.||..||||..|.||.||.|||||||||||.||
RBAM_012790__ 225 CAGCGTGACAAGGCAGACGCTCGCCGAGCAGAATCTTCCGCCGTC----- 269
BSNT_02183___ 290 AT------CATTGGTTCGGCACCGATGAACTCGGCCGGGATGTGTTTACC 333
| ||.||||||||.|||||||||||.||||||||.||||||||.
RBAM_012790__ 270 -TTTTTCACACTGGTTCGGAACCGATGAACTTGGCCGGGACGTGTTTACA 318
BSNT_02183___ 334 CGGACATGGTATGGCGCGAGAATCTCGTTGTTTGTCGGCGTGATGGCAGC 383
.|.||||||||.||.|||||.|||||.||.||||||||.||||||||.||
RBAM_012790__ 319 AGAACATGGTACGGAGCGAGGATCTCTTTATTTGTCGGTGTGATGGCGGC 368
BSNT_02183___ 384 ACTGATTGATTTTTTGATCGGTGTCATTTACGGAGGCGTTGCCGGCTATA 433
.|||||.||.|||||||||||.|||||.|||||||||||.||||||||.|
RBAM_012790__ 369 GCTGATCGACTTTTTGATCGGCGTCATCTACGGAGGCGTCGCCGGCTACA 418
BSNT_02183___ 434 AAGGCGGCAGGATTGACAGCATTATGATGCGGATTATCGAAGTGCTGTAC 483
||||.|||.|||..||||||...||||||.|.||.|||||.||.||.|||
RBAM_012790__ 419 AAGGGGGCCGGACAGACAGCGCCATGATGAGAATCATCGAGGTTCTCTAC 468
BSNT_02183___ 484 GGACTGCCATACCTGCTTGTTGTCATTTTGCTGATGGTGCTTATGGGGCC 533
|||.||||.||.|||||.||||||||||||.|.||||||||.||||||||
RBAM_012790__ 469 GGATTGCCGTATCTGCTCGTTGTCATTTTGTTAATGGTGCTGATGGGGCC 518
BSNT_02183___ 534 GGGACTGGGCACTATTATTGTGGCGCTGACTGTGACCGGATGGGTCGGCA 583
|||.||..|..|.|||||.||.||.|||||.|||||.|||||||||||||
RBAM_012790__ 519 GGGGCTCAGTTCCATTATCGTCGCTCTGACCGTGACGGGATGGGTCGGCA 568
BSNT_02183___ 584 TGGCGAGAATTGTAAGAGGCCAGGTGCTTCAGATTAAAAATTATGAATAT 633
|||||.|.|||||.|||||.||||||||...|||.||..||.|||||.|.
RBAM_012790__ 569 TGGCGCGGATTGTCAGAGGGCAGGTGCTGAGGATGAAGCATGATGAACAC 618
BSNT_02183___ 634 GTACTCGCCTCGAAAACCTTTGGCGCGAAAACCTTTCGCATCATCCGGAA 683
|||.|.||.||||||||.|||||.||||||||.|||||.|||||...|||
RBAM_012790__ 619 GTATTGGCTTCGAAAACGTTTGGAGCGAAAACATTTCGGATCATTAAGAA 668
BSNT_02183___ 684 GAATTTGCTGCCGAATACTATGGGAGCGATCATCGTACAAATGACATTAA 733
.|||.|||||||||||||.||||||||.||.||.||.||||||||..|.|
RBAM_012790__ 669 AAATCTGCTGCCGAATACGATGGGAGCCATTATTGTCCAAATGACGCTTA 718
BSNT_02183___ 734 CCGTACCTGCCGCCATATTCGCAGAATCATTTTTAAGCTTTCTCGGCCTC 783
|.||.||.||.||.||.||.||.||||||||||||||.||||||||.|||
RBAM_012790__ 719 CGGTGCCGGCGGCGATTTTTGCGGAATCATTTTTAAGTTTTCTCGGACTC 768
BSNT_02183___ 784 GGCATACAGGCTCCGTTTGCAAGTTGGGGCGTGATGGCGAATGACGGCCT 833
|||||.|||||.|||||||||||.|||||.||.|||||.||.|||||.||
RBAM_012790__ 769 GGCATTCAGGCGCCGTTTGCAAGCTGGGGAGTCATGGCAAACGACGGGCT 818
BSNT_02183___ 834 GCCCACGATTTTATCTGGGCATTGGTGGCGCCTGTTTTTTCCGGCCTTTT 883
|||..||||||||||.||.|||||||||||.||||||||.||.||.||||
RBAM_012790__ 819 GCCGGCGATTTTATCAGGCCATTGGTGGCGGCTGTTTTTCCCCGCTTTTT 868
BSNT_02183___ 884 TCATATCTCTGACGATGTACGCGTTTAATGTGCTGGGGGACGGATTGCAG 933
||||.||..|||||||||||||||||||.||.||.||.|||||.||||||
RBAM_012790__ 869 TCATTTCCTTGACGATGTACGCGTTTAACGTACTTGGAGACGGCTTGCAG 918
BSNT_02183___ 934 GATGCGCTTGACCCTAAGCTGAGGAGGTAG 963
||.|||.|.|||||.||.||||||||||||
RBAM_012790__ 919 GACGCGTTAGACCCGAAACTGAGGAGGTAG 948
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