Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02056 and RBAM_012240
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:46
# Commandline: needle
# -asequence dna-align/BSNT_02056___yjfB.1.9828.seq
# -bsequence dna-align/RBAM_012240___yjfB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02056___yjfB-RBAM_012240___yjfB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02056___yjfB-RBAM_012240___yjfB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02056___yjfB
# 2: RBAM_012240___yjfB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 185
# Identity: 124/185 (67.0%)
# Similarity: 124/185 (67.0%)
# Gaps: 28/185 (15.1%)
# Score: 417.0
#
#
#=======================================
BSNT_02056___ 1 ATGGATATCCCTGCTTTATCGGTTGCGATGCATCAAGCATCCCTTGCCCA 50
||||||||||||||.|||||..|.||.|||||.||||||||.||.||.||
RBAM_012240__ 1 ATGGATATCCCTGCGTTATCAATCGCTATGCACCAAGCATCTCTGGCGCA 50
BSNT_02056___ 51 GAATGTAAATATTGCTTTAACGAAAAAA-----ATGC----TGGACA--C 89
||||||||||||.|||||||| ||||| |||| ||.||| |
RBAM_012240__ 51 GAATGTAAATATCGCTTTAAC--AAAAACGGTCATGCAGCATGCACAGGC 98
BSNT_02056___ 90 CGCCCAGCAAAATGCCGATCAAACCTTAAAGATGAT------TCAACATC 133
.|| .||.||..||||..|.||.|||.| .||.||.|
RBAM_012240__ 99 TGC---------GGCGGAAGAAACAGTGAAAATGCTGCCGTCCCAGCACC 139
BSNT_02056___ 134 CGACTCTCGGGCAAACCATTGATGTAAAAGCATAA 168
|||||..|||.||..|.||||||||.||||..|||
RBAM_012240__ 140 CGACTGCCGGACATTCAATTGATGTGAAAGTGTAA 174
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