Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01979 and RBAM_011920
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:44
# Commandline: needle
# -asequence dna-align/BSNT_01979___yjcH.1.9828.seq
# -bsequence dna-align/RBAM_011920___ycjH.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01979___yjcH-RBAM_011920___ycjH.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01979___yjcH-RBAM_011920___ycjH.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01979___yjcH
# 2: RBAM_011920___ycjH
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 732
# Identity: 554/732 (75.7%)
# Similarity: 554/732 (75.7%)
# Gaps: 18/732 ( 2.5%)
# Score: 2054.5
#
#
#=======================================
BSNT_01979___ 1 ATGGCACCGAAAAACGGCA-CAGTGCAAGAAAAGAAATTCTTTTCAAAAG 49
.|||||.|.||||||||.| || |.||.||.||.|||.|.||.||..|.|
RBAM_011920__ 1 GTGGCATCAAAAAACGGAATCA-TTCATGAGAAAAAACTTTTCTCCCATG 49
BSNT_01979___ 50 AGCTTAACGAGGAAATGACCTTGCTTGTTTATCTGCCGTCCAACTACTCC 99
|||||.|.||||||||||||.|..|.||.||.|||||..|||.||.||||
RBAM_011920__ 50 AGCTTGAAGAGGAAATGACCGTTTTGGTCTACCTGCCCGCCACCTTCTCC 99
BSNT_01979___ 100 CCGCTTTATAAATACCATGTCATTATCGCGCAGGACGGCCACGATTATTT 149
||.||.||||||||.|||...||.|||||.|||||||||||.||||||||
RBAM_011920__ 100 CCTCTGTATAAATATCATACGATCATCGCTCAGGACGGCCATGATTATTT 149
BSNT_01979___ 150 CAGGCTGGGGAGAATCGGCAGACAGGTTGAGGAATTGCTGTCGAAACGCG 199
|||..|.|||||||||||..|.||||..||.||..|..||||.|||.|.|
RBAM_011920__ 150 CAGATTAGGGAGAATCGGGCGGCAGGCGGAAGAGCTTATGTCAAAAGGGG 199
BSNT_01979___ 200 AAATAGACCGGAGCATTATTATCGGTGTTCCTTATAAGGATGTAAAAGAG 249
||||.|||||..||||.||||||||.||.||||||||..||||....|||
RBAM_011920__ 200 AAATTGACCGCTGCATCATTATCGGCGTCCCTTATAAAAATGTGCGGGAG 249
BSNT_01979___ 250 CGCAGAAACACCTATCATCCGGAGGGTTCAAAATTTTCGGCT--TATAAA 297
||.||||||||.||.|||||.||.||.||.|| .||||.|| |||||.
RBAM_011920__ 250 CGAAGAAACACATACCATCCAGAAGGCTCTAA--GTTCGCCTCATATAAG 297
BSNT_01979___ 298 CGGTTCATCGCCCATGAGCTCGTTCCTTTTGCAGATGATGAGTATCCAAC 347
|||||||||||..|||||||||||||||||...||..|.||.||.||.||
RBAM_011920__ 298 CGGTTCATCGCAAATGAGCTCGTTCCTTTTATCGACAAAGAATACCCGAC 347
BSNT_01979___ 348 CTATCAGATCGGTTACGGCCGAACGCTGATCGGTGATTCGCTCGGAGCAA 397
.|||||..||||.||||||||.||..|||||||.|||||.|||||.|.||
RBAM_011920__ 348 TTATCAAGTCGGATACGGCCGCACCATGATCGGGGATTCCCTCGGCGGAA 397
BSNT_01979___ 398 CCGTGTCACTTATGACAGCGCTTGATTATCCGAATATGTTTGGCAACATC 447
||||.||.||.|||||.|||.||||.||||||||.||||||||.|||.||
RBAM_011920__ 398 CCGTTTCGCTCATGACGGCGATTGACTATCCGAACATGTTTGGAAACGTC 447
BSNT_01979___ 448 ATCATGCAGTCTCCCTATGTTGACAAACACGTACTAGAAGCCGTAAAACA 497
||||||||||||||.|||||||||...|||||.||.||.|||||....||
RBAM_011920__ 448 ATCATGCAGTCTCCGTATGTTGACGGGCACGTGCTGGATGCCGTCCGGCA 497
BSNT_01979___ 498 GTCAGACGATATCAAACACCTCTCTATTTATCACCAAATCGGAACAAAAG 547
|||.||.|||.|||||||..|.||..|||||||.|||||||||..|||||
RBAM_011920__ 498 GTCGGAGGATCTCAAACAGATTTCCGTTTATCATCAAATCGGAGAAAAAG 547
BSNT_01979___ 548 AAACTGACGTCCACACGACAGACGGGAACATTCTGGACTTTACAGAACCG 597
||||.|.|||.||||||||.|||||..|..||||.||.||.||.|..|||
RBAM_011920__ 548 AAACCGGCGTTCACACGACGGACGGCCAGGTTCTTGATTTCACCGCGCCG 597
BSNT_01979___ 598 AACCGGGAGCTGAAACAGCTGCTGGAGAAAAAGCTTTCCGA------TTA 641
|||...|||||.||||||||||||||.|..||.|..||.|| .||
RBAM_011920__ 598 AACGAAGAGCTTAAACAGCTGCTGGAAAGCAAACAGTCTGAATACACGTA 647
BSNT_01979___ 642 TGATTTCGAGCCATTTGACGGAGACCACAAATGGACATACTGGCAGCCGC 691
||| |.|| ||.|||||.||.||.||||||||.|||||||||||||
RBAM_011920__ 648 TGA-----AACC-TTCGACGGGGATCATAAATGGACCTACTGGCAGCCGC 691
BSNT_01979___ 692 TCATCACCCCGGCGCTGAAAAAAATGCTTTAA 723
|||||||.||||||||||||||||||||.|||
RBAM_011920__ 692 TCATCACGCCGGCGCTGAAAAAAATGCTGTAA 723
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