Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01820 and RBAM_010850
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:33
# Commandline: needle
# -asequence dna-align/BSNT_01820.1.9828.seq
# -bsequence dna-align/RBAM_010850___gerPE.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01820-RBAM_010850___gerPE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01820-RBAM_010850___gerPE.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01820
# 2: RBAM_010850___gerPE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 427
# Identity: 244/427 (57.1%)
# Similarity: 244/427 (57.1%)
# Gaps: 116/427 (27.2%)
# Score: 785.5
#
#
#=======================================
BSNT_01820 0 -------------------------------------------------- 0
RBAM_010850__ 1 ATGTTAAAGCGCATTTCACGCCTCCGGAACGCCAAAATCAATTCAGTCGG 50
BSNT_01820 1 ----------GTGTTTCAAGTTGGCGACACAAATGAAATCGATATGAGTG 40
||.|||||||..|||||.||.|||||||||.|||||.|..
RBAM_010850__ 51 GATTGCGAGTGTCTTTCAAGCAGGCGATACGAATGAAATCAATATGCGGA 100
BSNT_01820 41 TAAAAGTATTTGCTGTTCAGCGTTCTCTGTCCACGTTTTACA---ATAAT 87
|.||||||||.||.|.|||||||.||.|..|| ||.|||| ||.||
RBAM_010850__ 101 TCAAAGTATTGGCCGATCAGCGTACTATTGCC---TTATACAGAGATGAT 147
BSNT_01820 88 GAAGGCTCATTTAACAAAAAGGAGTACCAGATCTTTCAGCAGCAGGCAGT 137
||||||||||||||||||||.||.|||||||||||||.|||||.|||.||
RBAM_010850__ 148 GAAGGCTCATTTAACAAAAAAGAATACCAGATCTTTCGGCAGCCGGCCGT 197
BSNT_01820 138 GAAGCCGATTCCCGAAACAGGTGTACAAAGCGCATTTTGCCACGAGGTGC 187
.|.||||.|.||.|||||.||.||.|||||||||||.|||||.||....|
RBAM_010850__ 198 CATGCCGTTACCAGAAACGGGAGTCCAAAGCGCATTCTGCCATGAAAACC 247
BSNT_01820 188 CGGCTATT----TATGTTCGCAGCA---TCAAAATTCAAGGGGT---GTC 227
|..|.||| || ||.| |.|||.|||||||||| |||
RBAM_010850__ 248 CTTCAATTCGGGTA-------AGGAATGTGAAAGTTCAAGGGGTATCGTC 290
BSNT_01820 228 CGCCTCTTC-TGTTTTACATGCTGGTTCAGCTTCGCTTATCCGCGGTGAT 276
.||.|| | ||.||.|.|| .||.||..|.||| ||| ||..|
RBAM_010850__ 291 AGCGTC--CGTGGTTCAAAT--CGGATCGACGTCG---ATC----GTTCT 329
BSNT_01820 277 GCGAGAATC-------AAACATATCAGACAGATTCAGT--CTCCGCGCTC 317
|.||||.|| ||||||||.||.|||||| || |.||..||||
RBAM_010850__ 330 GGGAGATTCGCGGCTGAAACATATTAGGCAGATT--GTCACACCAAGCTC 377
BSNT_01820 318 ACAATCGC--CCGCCAAGAACATATAA 342
||||||.| |.|||..||
RBAM_010850__ 378 ACAATCACAGCAGCCCTGA-------- 396
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