Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01332 and RBAM_008200
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:02
# Commandline: needle
# -asequence dna-align/BSNT_01332___yfjS.1.9828.seq
# -bsequence dna-align/RBAM_008200___pdaA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01332___yfjS-RBAM_008200___pdaA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01332___yfjS-RBAM_008200___pdaA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01332___yfjS
# 2: RBAM_008200___pdaA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 794
# Identity: 649/794 (81.7%)
# Similarity: 649/794 (81.7%)
# Gaps: 4/794 ( 0.5%)
# Score: 2650.5
#
#
#=======================================
BSNT_01332___ 1 ATGAAGTGGATGTGTTCAATATGCTGCGCCGCCGTATTGCTTGCCGGAGG 50
|||||.|||.|.||||||||.||||||...|||||.||.|||||.||||
RBAM_008200__ 1 ATGAAATGGTTTTGTTCAATTTGCTGCATGGCCGTTTTTCTTGCGGGAG- 49
BSNT_01332___ 51 TGCAGC-ACAG-GCGGAAGCGGTGCCGAATGAGCCGATTAATTGGGGCTT 98
|||.| |||| ||.|||||.|||||||||||.|.|||.||.|||||.||
RBAM_008200__ 50 -GCATCAACAGCGCAGAAGCCGTGCCGAATGAACGGATAAACTGGGGATT 98
BSNT_01332___ 99 TAAACGAAGTGTCAATCATCAGCCGCCAGATGCCGGGAAGCAGCTGAACA 148
||||||.||.|||||||||||||||||.||||||||.|..||||||.|||
RBAM_008200__ 99 TAAACGCAGCGTCAATCATCAGCCGCCGGATGCCGGCAGACAGCTGGACA 148
BSNT_01332___ 149 GTTTAATTGAAAAATATGACGCGTTTTATTTAGGGAATACAAAGGAAAAA 198
.|.|..|..||||||||||.||.|||||||||||.|||||.||.|||||.
RBAM_008200__ 149 ATCTGGTCAAAAAATATGATGCCTTTTATTTAGGCAATACGAAAGAAAAG 198
BSNT_01332___ 199 ACGATTTACTTAACGTTTGATAACGGATATGAAAATGGCTATACGCCAAA 248
||.||.||.|||||||||||||||||||||||||||||.||.||.||.||
RBAM_008200__ 199 ACCATCTATTTAACGTTTGATAACGGATATGAAAATGGGTACACCCCGAA 248
BSNT_01332___ 249 AGTGCTTGATGTCTTAAAAAAACATCGCGTAACAGGAACGTTTTTTGTCA 298
||||||||||||.|||||||||||||.|||.||.||.||.||||||||||
RBAM_008200__ 249 AGTGCTTGATGTGTTAAAAAAACATCACGTCACGGGCACTTTTTTTGTCA 298
BSNT_01332___ 299 CCGGGCATTTCGTAAAGGACCAGCCTCAGCTGATCAAACGAATGTCAGAT 348
|.||.|||||.||.||.||.||||||.|..||||.|||||.||||||.|.
RBAM_008200__ 299 CGGGTCATTTTGTGAAAGAGCAGCCTGATTTGATTAAACGGATGTCAAAG 348
BSNT_01332___ 349 GAGGGCCATATTATCGGCAACCATTCCTTTCACCATCCGGATTTAACGAC 398
||.||||||||.||||||||.|||||.|||||.|||||.|||.|.|||||
RBAM_008200__ 349 GAAGGCCATATCATCGGCAATCATTCTTTTCATCATCCTGATCTGACGAC 398
BSNT_01332___ 399 AAAAACAGCTGATCAGATTCAGGATGAACTAGATTCAGTCAACGAAGAGG 448
||||||.|..|||||||||||.||.|||||.|||||.||||..||||..|
RBAM_008200__ 399 AAAAACGGGCGATCAGATTCAAGACGAACTCGATTCCGTCACGGAAGCTG 448
BSNT_01332___ 449 TTTATAAAATTACGGGAAAGCAGGACAATCTGTACTTGCGTCCGCCGCGT 498
|.||.||.|||||.|||||||.||||||.|||||..|.|||||||||||.
RBAM_008200__ 449 TGTACAACATTACCGGAAAGCGGGACAACCTGTATCTCCGTCCGCCGCGC 498
BSNT_01332___ 499 GGCGTGTTCAGTGAGTACGTACTGAAAGAAACGAAACGCCTCGGCTATCA 548
|||||.|||||.||.||.||.||||||||||||||.|||||||||||.||
RBAM_008200__ 499 GGCGTATTCAGCGAATATGTCCTGAAAGAAACGAAGCGCCTCGGCTACCA 548
BSNT_01332___ 549 AACCGTTTTCTGGTCGGTCGCTTTTGTTGATTGGAAAATCAACAACCAAA 598
|||||||||||||||.|||||.|||||.||.|||||..|.|||.|.||||
RBAM_008200__ 549 AACCGTTTTCTGGTCCGTCGCATTTGTCGACTGGAAGGTTAACGAGCAAA 598
BSNT_01332___ 599 AGGGGAAGAAATATGCCTACGATCATATGATTAAGCAGGCGCACCCGGGA 648
|.|||||..||||.|||||.|||||.|||||.||||||||.||.||.||.
RBAM_008200__ 599 AAGGGAAACAATACGCCTATGATCACATGATAAAGCAGGCTCATCCCGGC 648
BSNT_01332___ 649 GCCATTTACCTGCTGCACACCGTATCAAGGGACAATGCTGAAGCACTGGA 698
||.||.|||||.||.||||||||.||||.|||||||.|.|||||.|||||
RBAM_008200__ 649 GCGATCTACCTTCTCCACACCGTTTCAAAGGACAATTCAGAAGCTCTGGA 698
BSNT_01332___ 699 TGATGCGATTACAGATCTGAAAAAACAGGGCTACACTTTTAAAAGCATTG 748
.|||||.|||||.|||.||||||||.|.||||||||.|||||||||||||
RBAM_008200__ 699 CGATGCCATTACCGATTTGAAAAAAGAAGGCTACACGTTTAAAAGCATTG 748
BSNT_01332___ 749 ATGATCTGATGTTTGAGAAAGAAATGAAGATGCCGTCCTTGTAA 792
||||.||||||||||||||||||||||||.|||||..|.||||.
RBAM_008200__ 749 ATGACCTGATGTTTGAGAAAGAAATGAAGCTGCCGCGCCTGTAG 792
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