Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00963 and RBAM_007950

See Amino acid alignment / Visit BSNT_00963 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:39
# Commandline: needle
#    -asequence dna-align/BSNT_00963___ydgA.1.9828.seq
#    -bsequence dna-align/RBAM_007950___ydgA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00963___ydgA-RBAM_007950___ydgA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00963___ydgA-RBAM_007950___ydgA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00963___ydgA
# 2: RBAM_007950___ydgA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 245
# Identity:     181/245 (73.9%)
# Similarity:   181/245 (73.9%)
# Gaps:           4/245 ( 1.6%)
# Score: 644.0
# 
#
#=======================================

BSNT_00963___      1 ATGCCATATCAAATTAACATCGCAAATATTAAGATCAACGGCGTCACGCA     50
                     |||||.||.|||||||||.|||..|||||.||..|.|||||.|..|||||
RBAM_007950__      1 ATGCCTTACCAAATTAACGTCGTCAATATAAAAGTAAACGGAGCAACGCA     50

BSNT_00963___     51 AAACGGAAATATAGATGTCGGCCCGACTGTGCACAACAGCCATACTGCGA    100
                     |||||||||..|.|||.||||.|.|||.||.||.||||||||.||.||.|
RBAM_007950__     51 AAACGGAAACGTCGATATCGGTCAGACCGTACAAAACAGCCACACCGCCA    100

BSNT_00963___    101 ACAGCAAATATTTTGGAGCAAACTTTTCCTTAGGGGATCTTTCGCCTACG    150
                     |||||||||.|.|.||.||.||||||||.|||||||||.|||||||..|.
RBAM_007950__    101 ACAGCAAATTTGTCGGCGCGAACTTTTCTTTAGGGGATTTTTCGCCGGCC    150

BSNT_00963___    151 TCTTCACTTTTGAACACTGGAAATATTGATTCAGACGTTAGTGACCAAGA    200
                     .|...|..||||||..|.||..||.||||..|.|||||.||.||.||.||
RBAM_007950__    151 GCCGGATGTTTGAATTCGGGCCATCTTGACCCTGACGTGAGCGATCAGGA    200

BSNT_00963___    201 CCAAATCGGAAACCCTTC--TGCACCGATCGCAAATCAAATTTAA    243
                     .||.||||..|||||.||  ||  |||||||||||||||||.||.
RBAM_007950__    201 TCAGATCGCCAACCCGTCAATG--CCGATCGCAAATCAAATATAG    243


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