Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01057 and RBAM_006560
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:44
# Commandline: needle
# -asequence dna-align/BSNT_01057___ydjE.1.9828.seq
# -bsequence dna-align/RBAM_006560___ydjE.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01057___ydjE-RBAM_006560___ydjE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01057___ydjE-RBAM_006560___ydjE.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01057___ydjE
# 2: RBAM_006560___ydjE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 963
# Identity: 784/963 (81.4%)
# Similarity: 784/963 (81.4%)
# Gaps: 36/963 ( 3.7%)
# Score: 3348.0
#
#
#=======================================
BSNT_01057___ 1 ------------------------------------TTGATTGATTTCTT 14
||.|||||||||||
RBAM_006560__ 1 GTGGGAAGCCAATCTGTTATTTGTATTGGAGAATTGTTAATTGATTTCTT 50
BSNT_01057___ 15 TTGTACCGATGTTGACGTTGATTTAATGGAAGGGCGCCATTTCCTGAAAA 64
||||||||||||.||.||||||||.|..|||||.|||.|||||.|.||||
RBAM_006560__ 51 TTGTACCGATGTGGATGTTGATTTGACAGAAGGACGCAATTTCTTAAAAA 100
BSNT_01057___ 65 GTGCCGGCGGGGCACCGGCGAATGTGTCGGCAGCGATTGCCAAGCTGGGA 114
||||||||||.||||||||||||||||||||.||.|||||.||||||||.
RBAM_006560__ 101 GTGCCGGCGGCGCACCGGCGAATGTGTCGGCTGCCATTGCTAAGCTGGGC 150
BSNT_01057___ 115 GGAGACGCCGCTTTCAGCGGAAAAGTAGGAAAGGATCCGTTTGGGTATTT 164
||||||||.|||||||||||.|||..|||.||.||||||||.||||||||
RBAM_006560__ 151 GGAGACGCGGCTTTCAGCGGGAAAACAGGCAAAGATCCGTTCGGGTATTT 200
BSNT_01057___ 165 TTTGAAGCGAACATTGGACGCTGTACATGTCGATACCTCTATGCTGGTGA 214
|.||||||..|||||||||||.|.|||||||||||||||||||||.||.|
RBAM_006560__ 201 TCTGAAGCAGACATTGGACGCCGCACATGTCGATACCTCTATGCTTGTCA 250
BSNT_01057___ 215 TGGATGAGAAAGCGCCTACAACGCTTGCTTTTGTTTCATTAAAACAAAAT 264
||||||||||||||||||||||||||||.||||||||||||||||||||.
RBAM_006560__ 251 TGGATGAGAAAGCGCCTACAACGCTTGCGTTTGTTTCATTAAAACAAAAC 300
BSNT_01057___ 265 GGAGAGCGTGACTTTGTTTTTAATAGAGGCGCGGACGCTTTGTTTACGCT 314
||.|||||.||||||||.|||||.|||||.||||||||||||||||||||
RBAM_006560__ 301 GGGGAGCGCGACTTTGTGTTTAACAGAGGAGCGGACGCTTTGTTTACGCT 350
BSNT_01057___ 315 GGAGGATATTGACCAGGAAAAACTAAACGGAGCGAAAATCCTTCATTTCG 364
|||.||||||||.|.||||||..|||||||.|||||||||.|||||||||
RBAM_006560__ 351 GGATGATATTGATCTGGAAAAGGTAAACGGTGCGAAAATCGTTCATTTCG 400
BSNT_01057___ 365 GCTCTGCGACGGCACTGTTATCAGATCCATTTTGCTCAGCCTATTTACGG 414
|.||.|||||.|||.|||||||.|||||.|||||||||||||||||||||
RBAM_006560__ 401 GATCAGCGACAGCATTGTTATCTGATCCGTTTTGCTCAGCCTATTTACGG 450
BSNT_01057___ 415 CTGATGTCGATTGCGAAAGACAATGGACAGTTTATTTCGTTTGACCCTAA 464
||||||||||||||||||||||||||||||||||||||.||.||.|||||
RBAM_006560__ 451 CTGATGTCGATTGCGAAAGACAATGGACAGTTTATTTCCTTCGATCCTAA 500
BSNT_01057___ 465 CTACCGTGAAGATTTATGGAGGGGAAGAGTCTCAGAGTTTGTAAGTGTTG 514
|||||||||.||||||||||..||||||||.|||||||||.|||.....|
RBAM_006560__ 501 CTACCGTGAGGATTTATGGAAAGGAAGAGTTTCAGAGTTTATAAACACCG 550
BSNT_01057___ 515 CGAAAAAAGCGATCGCTGTAAGTGATTTTGTGAAAGTCAGTGACGAGGAA 564
|.||||||||..|.||.|||||||||||||||||||||||||||||.||.
RBAM_006560__ 551 CAAAAAAAGCCGTTGCCGTAAGTGATTTTGTGAAAGTCAGTGACGAAGAG 600
BSNT_01057___ 565 CTTGAGATTATCAGCGGTGTGAAGGATCATGAAAAGGGTGTTGCGATCCT 614
||||||||.||||||||||.||||||||||.||.|.|||||||||.|.||
RBAM_006560__ 601 CTTGAGATCATCAGCGGTGCGAAGGATCATAAAGAAGGTGTTGCGGTTCT 650
BSNT_01057___ 615 TCATGAGATCGGAGCCAACATTGTCGCTGTGACACTTGGGAAAAGCGGAA 664
|||||||.|.||||||..||||||.||.||||||.|.|||||||.|||.|
RBAM_006560__ 651 TCATGAGCTTGGAGCCGGCATTGTGGCGGTGACAATCGGGAAAAACGGTA 700
BSNT_01057___ 665 CGCTTCTTTCCAATGGAAAAGACCGTGAAATCATTCCAAGCATTCCGGTG 714
|.||||||||.|||||.||.||...|||.||||||||.||||||||||||
RBAM_006560__ 701 CCCTTCTTTCAAATGGGAAGGATATTGACATCATTCCGAGCATTCCGGTG 750
BSNT_01057___ 715 ACATCAATCGATTCAACAGGGGCGGGAGATGCTTTTGTCGGTGCGGCTTT 764
||||||||.||.|||||.||.|||||||||||.||||||||.|||||..|
RBAM_006560__ 751 ACATCAATAGACTCAACGGGAGCGGGAGATGCGTTTGTCGGCGCGGCGCT 800
BSNT_01057___ 765 ATATCAATTGGCAAACACGGATCAGATTCAATCTGTAGAAGCAGATTTTG 814
.|||||..||||...|||||||.|||||||..|.|.||..|..|||||||
RBAM_006560__ 801 GTATCAGCTGGCGCGCACGGATGAGATTCAGACGGCAGCCGATGATTTTG 850
BSNT_01057___ 815 TGAAACTGCGTGAGATTGTGGCGTTTGCCAATAAGGTCGGAGCTCTTGTG 864
.|||.||||||||.|||||..|.||||||||||||||.||.||.||.|||
RBAM_006560__ 851 CGAAGCTGCGTGATATTGTCTCATTTGCCAATAAGGTGGGGGCGCTCGTG 900
BSNT_01057___ 865 TGCACTAAAATGGGAGCGATTGATGCACTGCCGAGCTTGGATGAGATCGA 914
|||||.|||||.||.|||||.|||||..|||||||.||..|.|||.|.||
RBAM_006560__ 901 TGCACCAAAATCGGTGCGATCGATGCTTTGCCGAGTTTAAAAGAGGTTGA 950
BSNT_01057___ 915 AGTTTCTTTGTAA 927
|||.||..|||||
RBAM_006560__ 951 AGTATCACTGTAA 963
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