Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01031 and RBAM_006360
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:42
# Commandline: needle
# -asequence dna-align/BSNT_01031___ydiB.1.9828.seq
# -bsequence dna-align/RBAM_006360___ydiB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01031___ydiB-RBAM_006360___ydiB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01031___ydiB-RBAM_006360___ydiB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01031___ydiB
# 2: RBAM_006360___ydiB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 479
# Identity: 384/479 (80.2%)
# Similarity: 384/479 (80.2%)
# Gaps: 4/479 ( 0.8%)
# Score: 1535.0
#
#
#=======================================
BSNT_01031___ 1 GTGAAGCAATTAAAATGGAGAACTGTAAATCCAGAAGAAACAAAAGCAAT 50
.|||||..||||.||||||||||...|||.||.||||||||.|||||..|
RBAM_006360__ 1 TTGAAGACATTACAATGGAGAACGAAAAACCCCGAAGAAACGAAAGCCGT 50
BSNT_01031___ 51 TGCCAAGCTTGCGGCAGCGTTTGCTAAACCGGGAGACGTCCTGACATTAG 100
.|||||||||||.||..|.||.||.||.|||||||||.|..|||||.|.|
RBAM_006360__ 51 AGCCAAGCTTGCCGCTTCTTTGGCAAAGCCGGGAGACATTTTGACACTGG 100
BSNT_01031___ 101 AGGGCGATTTAGGTGCAGGAAAAACGACTTTTACGAAAGGTTTTGCAGAA 150
|.|||||.|||||.||.|||||||||||||||||.||.||||||||.|||
RBAM_006360__ 101 AAGGCGACTTAGGCGCGGGAAAAACGACTTTTACAAAGGGTTTTGCCGAA 150
BSNT_01031___ 151 GGGCTGGGAATTACACGTATTGTAAACAGTCCGACTTTTACAATTATAAA 200
||.||||||||.||..|..|.||||||||.||||||||||||||||||||
RBAM_006360__ 151 GGACTGGGAATCACGAGGGTGGTAAACAGCCCGACTTTTACAATTATAAA 200
BSNT_01031___ 201 AGAATATAACGATGG--CGTACTTCCTCTTTATCACATGGATGTGTATAG 248
||||||..|.||.|| || ||||||||.|||||.||||||||||||.|
RBAM_006360__ 201 AGAATACCATGACGGTTCG--CTTCCTCTATATCATATGGATGTGTATCG 248
BSNT_01031___ 249 AATGGAAGATGAAAGTGAAGATTTGGGACTTGATGAATATTTTCACGGAC 298
.|||||.||||||||.|||||.||.||.|||||.|||||||||.|.||||
RBAM_006360__ 249 TATGGAGGATGAAAGCGAAGACTTAGGGCTTGAAGAATATTTTGAGGGAC 298
BSNT_01031___ 299 AAGGTGTCTGTCTCGTTGAATGGGCTCATTTAATTGAAGAACAGCTGCCA 348
||||.|||||..|..||||||||||||||||||||.|.||.||||||||.
RBAM_006360__ 299 AAGGCGTCTGCTTAATTGAATGGGCTCATTTAATTCAGGATCAGCTGCCT 348
BSNT_01031___ 349 CAGGAGCGACTGCAAATTGTCATCAAAAGAGCTGGTGATGATGAGCGGGA 398
...||.||.|||||.||.|||||||.||||||.||||||||.|...||||
RBAM_006360__ 349 GCTGAACGGCTGCAGATCGTCATCACAAGAGCCGGTGATGAGGCAAGGGA 398
BSNT_01031___ 399 AATTACCTTTACTGCTGTCGGGAATCGGTATGAAATGCTTTGTGAGGAGT 448
.|||||||||||.|||..|||.|..||||||||||.|||||||||||||.
RBAM_006360__ 399 CATTACCTTTACGGCTTGCGGAACACGGTATGAAACGCTTTGTGAGGAGA 448
BSNT_01031___ 449 TAAGTAGACATGACAATATTAGCAATTGA 477
|||.||.|||||||||||.|.||||||||
RBAM_006360__ 449 TAAATAAACATGACAATACTGGCAATTGA 477
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