Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03473 and RBAM_004580
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:42
# Commandline: needle
# -asequence dna-align/BSNT_03473___ypzD.1.9828.seq
# -bsequence dna-align/RBAM_004580___ypzD.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03473___ypzD-RBAM_004580___ypzD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03473___ypzD-RBAM_004580___ypzD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03473___ypzD
# 2: RBAM_004580___ypzD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 213
# Identity: 159/213 (74.6%)
# Similarity: 159/213 (74.6%)
# Gaps: 0/213 ( 0.0%)
# Score: 579.0
#
#
#=======================================
BSNT_03473___ 1 ATGATTGATTATCCTATTAATATAAACAACGTTTCCGGGAACAGTGTAAT 50
|||||.||||..||||||||.||.||.|||.|..|.||.||..|.||.||
RBAM_004580__ 1 ATGATGGATTCCCCTATTAAAATTAATAACTTAACAGGAAATGGAGTTAT 50
BSNT_03473___ 51 TAACGTAGGCGGCGCTTTTATGATCAGGCCTTTAACTTTGTCCAAATCTG 100
.||.||.||||||||.||.|..||||..|||.||||....||.|||.|.|
RBAM_004580__ 51 CAATGTCGGCGGCGCGTTAACCATCACCCCTATAACCGCTTCAAAAACAG 100
BSNT_03473___ 101 TGTTTGGCTCCGGAGGTTTAAACACAGGAATTGTCTTTGAAAATAACTTT 150
|||||||.||||||||||||||.||.|||||||||.|..||||.||||.|
RBAM_004580__ 101 TGTTTGGATCCGGAGGTTTAAATACTGGAATTGTCATCCAAAACAACTCT 150
BSNT_03473___ 151 GTAAGCAAGGCTAAAATGATTAATCATCAATTTACTGATCAGAACGTCAC 200
||||||.||.|.|||||||||...|||||||||.|.||||||||.||.|.
RBAM_004580__ 151 GTAAGCCAGTCGAAAATGATTGGCCATCAATTTTCAGATCAGAAGGTTAT 200
BSNT_03473___ 201 CAAAACTTTTTAA 213
.|||||.|||||.
RBAM_004580__ 201 AAAAACGTTTTAG 213
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