Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_06058 and RBAM_003940
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:32
# Commandline: needle
# -asequence dna-align/BSNT_06058___yxeO.1.9828.seq
# -bsequence dna-align/RBAM_003940___yxeO.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_06058___yxeO-RBAM_003940___yxeO.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06058___yxeO-RBAM_003940___yxeO.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06058___yxeO
# 2: RBAM_003940___yxeO
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 758
# Identity: 571/758 (75.3%)
# Similarity: 571/758 (75.3%)
# Gaps: 16/758 ( 2.1%)
# Score: 2106.0
#
#
#=======================================
BSNT_06058___ 1 TTGATAACAGTAAAAAATATTCGCAAAGCGTTTAAAGATCTCGTCGTGCT 50
.|||||..|||.|.|.|||||||.|||||.||||||||.||...|||.||
RBAM_003940__ 1 ATGATACAAGTCAGACATATTCGAAAAGCATTTAAAGACCTTACCGTACT 50
BSNT_06058___ 51 CGACGGAATCGATCTAGAAGTGAAACGCGGAGAAGTGGTGGCAATCATCG 100
.|||||.|||||.||.||..|.|||.||||.|||||...|||.|||||||
RBAM_003940__ 51 TGACGGGATCGACCTTGAGATCAAAAGCGGCGAAGTCACGGCCATCATCG 100
BSNT_06058___ 101 GTCCGTCCGGTTCCGGAAAATCAACGCTTCTCCGGTGCTTAAATTTATTA 150
|.|||||.||.||.||||||||||||||.|||||.||.||.|||.|..|.
RBAM_003940__ 101 GCCCGTCAGGCTCGGGAAAATCAACGCTCCTCCGTTGTTTGAATCTGCTG 150
BSNT_06058___ 151 GAGCGTCCGGATCAAGGACTTATTGAAATCGGAGAAGCCAAACTGAACGC 200
|||||.||||||.|.||..|.|||||||||||.||.||.||.|||||.||
RBAM_003940__ 151 GAGCGCCCGGATGACGGCATCATTGAAATCGGTGATGCAAAGCTGAATGC 200
BSNT_06058___ 201 GGAAAAG-----TTTACACGCAAGGAAG--CATATCGGCTTCGCCAGCAA 243
|| |.|.|.|||||.||.| |||| .||||||||||||.
RBAM_003940__ 201 -----AGCGTCCTATTCGCGCAAAGACGTTCATA--AGCTTCGCCAGCAG 243
BSNT_06058___ 244 ACGGCCATGGTCTTTCAAAACTACAATCTGTTTAAAAATAAAACGGCTCT 293
|||||.|||||.|||||.||.|||||.|||||.|||||.|||||.||.||
RBAM_003940__ 244 ACGGCGATGGTGTTTCAGAATTACAACCTGTTCAAAAACAAAACCGCCCT 293
BSNT_06058___ 294 GCAAAACATTACAGAAGCTTTAATCGTGGCTCAACATAAACCACGCGACG 343
||||||..|.|||||.||..|.|||...||.|||.|.|||||..|..|.|
RBAM_003940__ 294 GCAAAATGTGACAGAGGCGCTGATCACCGCGCAAAAGAAACCGAGAAAAG 343
BSNT_06058___ 344 AAGCGAAACGTATTGGAATGGAGATTCTGAAACAAGTCGGTCTGGAGCAT 393
|||||.|||..||.||.|||||..|.|||...|||||||||.|.||.||.
RBAM_003940__ 344 AAGCGGAACAGATCGGTATGGATCTGCTGCGGCAAGTCGGTTTAGAACAC 393
BSNT_06058___ 394 AAGGCTGACAGCTATCCGATCACAATGTCCGGCGGCCAGCAGCAGCGAAT 443
||.||.||||||||.|||||.||.|||||.|||||.||||||||.||.||
RBAM_003940__ 394 AAAGCGGACAGCTACCCGATTACGATGTCAGGCGGACAGCAGCAACGGAT 443
BSNT_06058___ 444 CGGCATCGCCCGGGCGCTT-GCGGTCAATCCGCATGCGATTTTGCTGGAT 492
|||.||.||.||.|| ||| ||.||..||||.||.||||||||.||||||
RBAM_003940__ 444 CGGGATTGCGCGCGC-CTTGGCCGTTGATCCTCACGCGATTTTACTGGAT 492
BSNT_06058___ 493 GAACCAACTTCAGCGCTTGACCCTGAGCTCGTCACAGGGGTGCTTCAGGT 542
|||||.|||||.||.||||||||||||||.||..|.||||||||.||.||
RBAM_003940__ 493 GAACCGACTTCGGCCCTTGACCCTGAGCTTGTAGCCGGGGTGCTCCAAGT 542
BSNT_06058___ 543 CATCAAGTCCATTGCGGAAAAGCAAACAACGATGATCATTGTTACACACG 592
||||||.||.|||||.|||||.||.|||||.||||||||.||.||.||.|
RBAM_003940__ 543 CATCAAATCAATTGCCGAAAAACAGACAACCATGATCATCGTCACGCATG 592
BSNT_06058___ 593 AAATGGCGTTTGCAAAAGAGGTCGCTGATAAAGTGATTTTTATGGCAGAC 642
|.|||||.|||||....||.||.||.||.||.||.||.||||||||.|||
RBAM_003940__ 593 AGATGGCTTTTGCGCGTGAAGTGGCCGACAAGGTCATATTTATGGCGGAC 642
BSNT_06058___ 643 GGCCATATTATCGAGCAGGGAACGCCAAAAGAACTGTTTGACCATCCGAA 692
||.|..||.|||||.|||||||||||..||||.|||||||||.|||||.|
RBAM_003940__ 643 GGACGCATCATCGAACAGGGAACGCCGGAAGAGCTGTTTGACAATCCGCA 692
BSNT_06058___ 693 AAACGAACGGACGAAACGATTTATCAAGCAGGTGGGAGAGCCTGCAGAGC 742
.|||||||||||||||..|||.||.|||||.|||||||||||.||.||.|
RBAM_003940__ 693 GAACGAACGGACGAAAAAATTCATTAAGCAAGTGGGAGAGCCCGCCGAAC 742
BSNT_06058___ 743 TTATATAA 750
||.|.|||
RBAM_003940__ 743 TTGTCTAA 750
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