Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00408 and RBAM_002710
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:10
# Commandline: needle
# -asequence dna-align/BSNT_00408___ybfM.1.9828.seq
# -bsequence dna-align/RBAM_002710___ybfM.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00408___ybfM-RBAM_002710___ybfM.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00408___ybfM-RBAM_002710___ybfM.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00408___ybfM
# 2: RBAM_002710___ybfM
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 495
# Identity: 379/495 (76.6%)
# Similarity: 379/495 (76.6%)
# Gaps: 12/495 ( 2.4%)
# Score: 1416.0
#
#
#=======================================
BSNT_00408___ 1 ATGGAATTAGTTCAGCAGCTCATAGCGGATTACGGTTATCTCGCTATTTT 50
|||||||||||||||||..|.|||.|.||||||||.|||.||||.|||||
RBAM_002710__ 1 ATGGAATTAGTTCAGCAATTAATATCCGATTACGGATATATCGCGATTTT 50
BSNT_00408___ 51 TTTGATGTTGGTATTAGGGATTGTAGGATTGCCGATTCCAGATGAAGTAA 100
|.|.|||.||..|.|.||.|||.|.||||||||.|||||.||||||||.|
RBAM_002710__ 51 TCTTATGCTGACACTCGGTATTATCGGATTGCCTATTCCGGATGAAGTCA 100
BSNT_00408___ 101 TGATGACCGTTGTTGGCTATTTCACGCAT----ACCGATGTGTTGAATTA 146
|||||||..||||.|||||.|||.|.||| || |||.|||||||
RBAM_002710__ 101 TGATGACGCTTGTAGGCTACTTCGCTCATTTAAAC----GTGCTGAATTA 146
BSNT_00408___ 147 TGAGCTTTCGATATTGATTAGTTTTGTCGGGGCTTTGTTAGGTATGCTGA 196
.|.|||.||.||..||||.||.|||.||||.||..|..|.||.|||.|.|
RBAM_002710__ 147 CGGGCTCTCCATTCTGATCAGCTTTATCGGAGCGCTCCTTGGGATGATTA 196
BSNT_00408___ 197 TCAGCTACATGATTGGCAGAAAAGCCGGACGCCCGTTTATCGACAAGTAC 246
||||||||.|.||.||||||||||||||.||.||||||||..|.||||.|
RBAM_002710__ 197 TCAGCTACTTCATCGGCAGAAAAGCCGGCCGGCCGTTTATTAATAAGTTC 246
BSNT_00408___ 247 GGCAAGTGGGTCGGCTTAAAAGAAAAAAGAATGATGAAAGTGGAAAAATG 296
||.||.|||||||||.|.||.|||||.||.|||..||||||.||.|..||
RBAM_002710__ 247 GGGAAATGGGTCGGCCTGAAGGAAAAGAGGATGGAGAAAGTAGACAGGTG 296
BSNT_00408___ 297 GATGAAGAAATACGGTCCATATTCTCTTATTTTAGGTTATTTTATTCCCG 346
|||||||||.|||||.||.||..|..||||||||||||||||.||.||||
RBAM_002710__ 297 GATGAAGAAGTACGGGCCGTACACCATTATTTTAGGTTATTTCATCCCCG 346
BSNT_00408___ 347 GCGTCAGACATGTGACGTGCTACTTTTCGGGGATCGGCAAAATGGATCTG 396
||.|||||||.|||||.|||||||||||.||.|||||||.||||||..|.
RBAM_002710__ 347 GCATCAGACACGTGACCTGCTACTTTTCCGGAATCGGCAGAATGGAATTC 396
BSNT_00408___ 397 AAAACGTA-TGTTGCGTTTGCGGCAATCGGCGCCTTTTTATGGTGCTTTG 445
|||||.|| |..||| ||.||.||.|||||.||.|||||||||||.|||.
RBAM_002710__ 397 AAAACCTACTTATGC-TTCGCCGCCATCGGAGCGTTTTTATGGTGTTTTA 445
BSNT_00408___ 446 TTTTTATTACAATCGGAAGGGTTATAGGGATTATTC-ATGTTTAA 489
||||||||||.||.||||...|.||| |||.||.|| ||||||||
RBAM_002710__ 446 TTTTTATTACTATAGGAAAATTCATA-GGAGTAATCAATGTTTAA 489
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