Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00376 and RBAM_002600

See Amino acid alignment / Visit BSNT_00376 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:09
# Commandline: needle
#    -asequence dna-align/BSNT_00376___glpQ.1.9828.seq
#    -bsequence dna-align/RBAM_002600___glpQ.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00376___glpQ-RBAM_002600___glpQ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00376___glpQ-RBAM_002600___glpQ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00376___glpQ
# 2: RBAM_002600___glpQ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 900
# Identity:     671/900 (74.6%)
# Similarity:   671/900 (74.6%)
# Gaps:          30/900 ( 3.3%)
# Score: 2471.0
# 
#
#=======================================

BSNT_00376___      1 ATGAGAAAAAATAGAATACTGGCCTTGTTTGTTCTGTCGCTGGGCTTACT     50
                     |||.|.|||.|||.|.|..|.||.|||.|..|.||.||..|.||.|||.|
RBAM_002600__      1 ATGCGGAAACATAAATTGTTTGCTTTGGTATTGCTTTCATTCGGTTTATT     50

BSNT_00376___     51 CTCATTTATGGTAACGCCAGTGTCGGCAGCGTCAAAAGGAAACCTGCTGT    100
                     .|||||.||.||.|||||.||.|||||||||..||||||||||||..|||
RBAM_002600__     51 GTCATTCATCGTCACGCCTGTATCGGCAGCGGGAAAAGGAAACCTCTTGT    100

BSNT_00376___    101 CACCTGACCGTATCCTGACCGTCGCGCACAGAGGGGCTTCTGGATATGTG    150
                     |.||||||.|.||..|||||.|.||.||..|.||.|||||.||.|||||.
RBAM_002600__    101 CTCCTGACAGAATTTTGACCATTGCCCATCGCGGTGCTTCGGGGTATGTC    150

BSNT_00376___    151 CCTGAGCACACGATTCTGTCTTACGAAACCGCTCAGAAAATGAAAGCTGA    200
                     ||.|||||||||||.||.|||||.|||||.||.||.||||||||.|||||
RBAM_002600__    151 CCGGAGCACACGATCCTTTCTTATGAAACTGCGCAAAAAATGAAGGCTGA    200

BSNT_00376___    201 TTATATTGAATTGGATCTGCAAATGACAAAAGACGGAAAATTGATTGTCA    250
                     .||||||||..|||||.|.|||||||||||||||||.||..||||.||||
RBAM_002600__    201 CTATATTGAGCTGGATTTACAAATGACAAAAGACGGCAAGCTGATCGTCA    250

BSNT_00376___    251 TGCATGACGAAAAACTGGACCGCACCACAAACGGAATGGGTTGGGTGAAA    300
                     |||||||.|||||||||||||||||||||||||||...||.||||||||.
RBAM_002600__    251 TGCATGATGAAAAACTGGACCGCACCACAAACGGACAAGGCTGGGTGAAG    300

BSNT_00376___    301 GACCATACGCTCGCAGACATTAAGAAGCTTGACGCCGGTTCTTGGTTTAA    350
                     ||.|||||..|.||.||.|||.|.|||||.||||||||.||||||||.||
RBAM_002600__    301 GATCATACATTAGCCGAGATTCAAAAGCTCGACGCCGGCTCTTGGTTCAA    350

BSNT_00376___    351 TGAAGCCTATCCGGAAAAAGCAAAGCCGCAGTACGTCGGCCTTAAAGTTC    400
                     |.|.||||||||||||||||||||.|||||.||||.|||.|||...||||
RBAM_002600__    351 TAAGGCCTATCCGGAAAAAGCAAAACCGCAATACGCCGGACTTCGCGTTC    400

BSNT_00376___    401 CTACATTAGAAGAGGTATTAGACCGTTTCGGAAAGCACGCGAACTACTAC    450
                     |.|||.|.||.||.||.|||.|.||.|||||.|..||.||.|||||.||.
RBAM_002600__    401 CCACACTTGATGACGTGTTAAAACGGTTCGGCAGACATGCAAACTATTAT    450

BSNT_00376___    451 ATTGAAACAAAATCGCCTGACACCTACCCAGGTATGGAAGAAAAACTGAT    500
                     |||||||||||..||||.||.||.||.||.||||||||||||||||||||
RBAM_002600__    451 ATTGAAACAAAGGCGCCCGAAACATATCCGGGTATGGAAGAAAAACTGAT    500

BSNT_00376___    501 CGCTTCTTTGCAGAAACATAAATTACTGGGGAAGCATTCTAAGCCAGGCC    550
                     ||||||..||.|.|||.|.|||||....||.||||||.|.||.|..||.|
RBAM_002600__    501 CGCTTCACTGAAAAAATACAAATTGGCAGGTAAGCATGCGAAACTTGGAC    550

BSNT_00376___    551 AGGTGATCATTCAATCGTTCAGCAAAGAAAGCCTGGTAAAAGTCCATCAA    600
                     |.||.||||||||.||.|||||||..||.|||||..|.|||    |||||
RBAM_002600__    551 AAGTTATCATTCAGTCTTTCAGCAGGGACAGCCTTCTGAAA----ATCAA    596

BSNT_00376___    601 TTACAG-------CCAAACCTGCCGACCGTTCAATTGCTGGAAGCCAAAC    643
                       ||||       |.||||.|.||| ||||.||||||||.|||||..|||
RBAM_002600__    597 --ACAGCTCGATCCGAAACTTCCCG-CCGTCCAATTGCTTGAAGCGGAAC    643

BSNT_00376___    644 AAATGGCGTCAATGACAGATGCTGCCCTGGAA--GAAATCAAAACATACG    691
                     |.|||.||||||||||.||.||.|  .|..||  ||.||.||||||||.|
RBAM_002600__    644 AGATGACGTCAATGACTGACGCAG--ATTTAACGGACATTAAAACATATG    691

BSNT_00376___    692 CTGTCGGTGCGGGCCCGGATTATAAAGCTTTAAA---TCAAGAAAACGTC    738
                     |.|||||....||.||||||||.|||||..|.||   ||   ||||.|||
RBAM_002600__    692 CCGTCGGAATCGGACCGGATTACAAAGCGCTGAACGCTC---AAAATGTC    738

BSNT_00376___    739 CGTATGATCCGCAGCCACGGCCTCCTGCTTCATCCTTACACAGTCAATAA    788
                     ||.|..||.||||||||||||||.|||||||||||||||||.||.||.|.
RBAM_002600__    739 CGAAACATTCGCAGCCACGGCCTTCTGCTTCATCCTTACACCGTAAACAG    788

BSNT_00376___    789 TGAAGCTGATATGCATCGCCTGCTTGATTGGGGCGTAACAGGAGTGTTCA    838
                     .||.||.||.||||..||.|||||..|||||||||||||.||.|||||.|
RBAM_002600__    789 CGAGGCGGACATGCGCCGTCTGCTGAATTGGGGCGTAACCGGTGTGTTTA    838

BSNT_00376___    839 CCAACTATCCTGATCTTTTCCACAAAGTAAAAAAGGGTTATTAA------    882
                     ||||||||.|.|||.|.|||||.||.||.|||||.|..||..||      
RBAM_002600__    839 CCAACTATGCGGATATATTCCAAAAGGTTAAAAAAGAATACAAATCATAA    888


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_00376 and RBAM_002600

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
