Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00195 and RBAM_001210
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:58
# Commandline: needle
# -asequence dna-align/BSNT_00195___yacO.1.9828.seq
# -bsequence dna-align/RBAM_001210___yacO.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00195___yacO-RBAM_001210___yacO.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00195___yacO-RBAM_001210___yacO.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00195___yacO
# 2: RBAM_001210___yacO
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 751
# Identity: 615/751 (81.9%)
# Similarity: 615/751 (81.9%)
# Gaps: 2/751 ( 0.3%)
# Score: 2519.0
#
#
#=======================================
BSNT_00195___ 1 ATGAGTCAGCAACATGATTACGTCATAGGGAAAAATGCAGTGATCGAGAC 50
|||||||||||||||||||||||||||||.|||||.||.|||||.|||||
RBAM_001210__ 1 ATGAGTCAGCAACATGATTACGTCATAGGAAAAAACGCTGTGATTGAGAC 50
BSNT_00195___ 51 GTTAAAATCTGATCGGAAGCTGTATAAGCTGTGGATGGCGGAAAACACCG 100
||||||.||.|||||.||||||||||||.|.|||||||||||||||||.|
RBAM_001210__ 51 GTTAAAGTCAGATCGCAAGCTGTATAAGTTATGGATGGCGGAAAACACAG 100
BSNT_00195___ 101 TAAAGGGACAAGCACAGCAAGTGATTGAGCTTGCCAAAAAGCAGGGAATC 150
||||.|||||.||.||||||||.||.||||||||.|||||||..||..||
RBAM_001210__ 101 TAAAAGGACAGGCGCAGCAAGTTATGGAGCTTGCTAAAAAGCGCGGCGTC 150
BSNT_00195___ 151 ACGATTCAATACGTCCCGAGAAAAAAACTCGATCAAATGGTGACAGGACA 200
||.|||||||..||.|||||.||||||||||||||.||||||...||.||
RBAM_001210__ 151 ACCATTCAATTTGTACCGAGGAAAAAACTCGATCAGATGGTGGAGGGGCA 200
BSNT_00195___ 201 GCATCAGGGCGTAGTGGCACAGGTTGCAGCGTATGAATATGCAGAACTGG 250
|||||||||.||.||.||.|||||.||.||.||||||||||||.||.|.|
RBAM_001210__ 201 GCATCAGGGTGTTGTCGCCCAGGTGGCGGCATATGAATATGCACAATTAG 250
BSNT_00195___ 251 ACGATTTATATAAAGCAGCCGAAGAAAAAAATGAACAGCCTTTCTTCCTC 300
||||.|||||||||..|||.|||||.|.|||.||||||||||||||.|||
RBAM_001210__ 251 ACGAATTATATAAAAGAGCGGAAGAGAGAAACGAACAGCCTTTCTTTCTC 300
BSNT_00195___ 301 ATTCTGGACGAGCTTGAAGACCCTCATAACCTTGGTTCCATTATGAGGAC 350
||.|||||||||||.||||||||||||||.||.||||||||.|||||.||
RBAM_001210__ 301 ATACTGGACGAGCTGGAAGACCCTCATAATCTCGGTTCCATCATGAGAAC 350
BSNT_00195___ 351 AGCAGATGCGGTCGGCGCTCATGGCATCGTCATTCCAAAACGGAGAGCTG 400
.||.||.||.|||||.||.||.||||||.|.|||||.|||||.|||||.|
RBAM_001210__ 351 GGCTGACGCTGTCGGTGCACACGGCATCATGATTCCGAAACGCAGAGCGG 400
BSNT_00195___ 401 TCGGGCTGACAACAACAGTGGCAAAAGCTTCAACAGGAGCAATTGAGCAC 450
||||.|||||..|.|||||.|||||||||||.||.||.||.|||||.|||
RBAM_001210__ 401 TCGGACTGACTTCGACAGTCGCAAAAGCTTCGACCGGTGCGATTGAACAC 450
BSNT_00195___ 451 ATTCCTGTAG-CAAGAGTCACCAATTTGGCACGGACGTTAGAAGAGATGA 499
|||||.||.| .||| ||.|||||..|.||.|||||..|.||.||.||||
RBAM_001210__ 451 ATTCCCGTCGTGAAG-GTGACCAACCTTGCCCGGACACTTGATGAAATGA 499
BSNT_00195___ 500 AAGAGCGGGGAATCTGGGTTGTCGGAACGGATGCGTCCGCGCGTGAGGAT 549
|.||||||||.||.|||||.||||||||||||||.|||||.||.||.||.
RBAM_001210__ 500 AGGAGCGGGGGATTTGGGTCGTCGGAACGGATGCATCCGCCCGGGAAGAC 549
BSNT_00195___ 550 TACCGTAATATGGACGGCAATATGCCTTTGGCTCTAGTCATCGGAAGTGA 599
|||||...||||||||||||.|||||||||||.||.||.||||||||.||
RBAM_001210__ 550 TACCGCTCTATGGACGGCAAGATGCCTTTGGCGCTCGTTATCGGAAGCGA 599
BSNT_00195___ 600 AGGAAAAGGGATGGGCCGCCTTGTGAAGGAAAAGTGCGATTTTCTCATTA 649
|||.|.|||.||||||||.||||||||.||.||.||.|||||||||||||
RBAM_001210__ 600 AGGCAGAGGAATGGGCCGGCTTGTGAAAGAGAAATGTGATTTTCTCATTA 649
BSNT_00195___ 650 AACTCCCGATGGCCGGAAAGGTAACTTCACTAAATGCATCTGTCGCGGCT 699
|.||.||||||||||||||.||.|||||.||.|||||.||.||.|||||.
RBAM_001210__ 650 AGCTTCCGATGGCCGGAAAAGTCACTTCTCTGAATGCGTCGGTAGCGGCC 699
BSNT_00195___ 700 GGTCTTTTGATGTATGAAGTCTACCGGAAACGAAACCCTGTGGGAGAATA 749
||.|||.|.||||||||||||||||||||.||.||.|||.|.||.||||.
RBAM_001210__ 700 GGCCTTCTCATGTATGAAGTCTACCGGAAGCGCAATCCTTTAGGGGAATG 749
BSNT_00195___ 750 A 750
|
RBAM_001210__ 750 A 750
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